Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22510 | 67753;67754;67755 | chr2:178579669;178579668;178579667 | chr2:179444396;179444395;179444394 |
N2AB | 20869 | 62830;62831;62832 | chr2:178579669;178579668;178579667 | chr2:179444396;179444395;179444394 |
N2A | 19942 | 60049;60050;60051 | chr2:178579669;178579668;178579667 | chr2:179444396;179444395;179444394 |
N2B | 13445 | 40558;40559;40560 | chr2:178579669;178579668;178579667 | chr2:179444396;179444395;179444394 |
Novex-1 | 13570 | 40933;40934;40935 | chr2:178579669;178579668;178579667 | chr2:179444396;179444395;179444394 |
Novex-2 | 13637 | 41134;41135;41136 | chr2:178579669;178579668;178579667 | chr2:179444396;179444395;179444394 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1394859997 | -1.295 | None | N | 0.193 | 0.113 | 0.0920862733494 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2775 | likely_benign | 0.2567 | benign | -0.899 | Destabilizing | 0.356 | N | 0.636 | neutral | None | None | None | None | N |
A/D | 0.4974 | ambiguous | 0.5416 | ambiguous | -0.23 | Destabilizing | 0.072 | N | 0.733 | prob.delet. | None | None | None | None | N |
A/E | 0.3337 | likely_benign | 0.3779 | ambiguous | -0.252 | Destabilizing | 0.055 | N | 0.658 | neutral | N | 0.482965353 | None | None | N |
A/F | 0.3085 | likely_benign | 0.2968 | benign | -0.857 | Destabilizing | 0.072 | N | 0.73 | prob.delet. | None | None | None | None | N |
A/G | 0.1713 | likely_benign | 0.1723 | benign | -0.974 | Destabilizing | 0.024 | N | 0.562 | neutral | N | 0.471355558 | None | None | N |
A/H | 0.4897 | ambiguous | 0.5059 | ambiguous | -1.028 | Destabilizing | 0.628 | D | 0.773 | deleterious | None | None | None | None | N |
A/I | 0.1591 | likely_benign | 0.1505 | benign | -0.185 | Destabilizing | None | N | 0.434 | neutral | None | None | None | None | N |
A/K | 0.4148 | ambiguous | 0.4667 | ambiguous | -0.749 | Destabilizing | 0.031 | N | 0.649 | neutral | None | None | None | None | N |
A/L | 0.1447 | likely_benign | 0.1369 | benign | -0.185 | Destabilizing | 0.001 | N | 0.488 | neutral | None | None | None | None | N |
A/M | 0.157 | likely_benign | 0.1573 | benign | -0.318 | Destabilizing | None | N | 0.455 | neutral | None | None | None | None | N |
A/N | 0.3541 | ambiguous | 0.4005 | ambiguous | -0.503 | Destabilizing | 0.072 | N | 0.741 | deleterious | None | None | None | None | N |
A/P | 0.5088 | ambiguous | 0.5331 | ambiguous | -0.321 | Destabilizing | 0.106 | N | 0.696 | prob.neutral | N | 0.515825286 | None | None | N |
A/Q | 0.3503 | ambiguous | 0.3725 | ambiguous | -0.585 | Destabilizing | 0.136 | N | 0.715 | prob.delet. | None | None | None | None | N |
A/R | 0.3694 | ambiguous | 0.4107 | ambiguous | -0.538 | Destabilizing | 0.072 | N | 0.701 | prob.neutral | None | None | None | None | N |
A/S | 0.1133 | likely_benign | 0.1183 | benign | -0.98 | Destabilizing | 0.012 | N | 0.443 | neutral | N | 0.515305211 | None | None | N |
A/T | 0.0737 | likely_benign | 0.0799 | benign | -0.877 | Destabilizing | None | N | 0.193 | neutral | N | 0.493660502 | None | None | N |
A/V | 0.0893 | likely_benign | 0.083 | benign | -0.321 | Destabilizing | None | N | 0.197 | neutral | N | 0.36640012 | None | None | N |
A/W | 0.6467 | likely_pathogenic | 0.6619 | pathogenic | -1.126 | Destabilizing | 0.864 | D | 0.787 | deleterious | None | None | None | None | N |
A/Y | 0.4333 | ambiguous | 0.4427 | ambiguous | -0.708 | Destabilizing | 0.136 | N | 0.772 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.