Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22516 | 67771;67772;67773 | chr2:178579651;178579650;178579649 | chr2:179444378;179444377;179444376 |
N2AB | 20875 | 62848;62849;62850 | chr2:178579651;178579650;178579649 | chr2:179444378;179444377;179444376 |
N2A | 19948 | 60067;60068;60069 | chr2:178579651;178579650;178579649 | chr2:179444378;179444377;179444376 |
N2B | 13451 | 40576;40577;40578 | chr2:178579651;178579650;178579649 | chr2:179444378;179444377;179444376 |
Novex-1 | 13576 | 40951;40952;40953 | chr2:178579651;178579650;178579649 | chr2:179444378;179444377;179444376 |
Novex-2 | 13643 | 41152;41153;41154 | chr2:178579651;178579650;178579649 | chr2:179444378;179444377;179444376 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs1199563785 | -0.851 | 0.989 | N | 0.831 | 0.425 | 0.656511762744 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
G/R | rs1199563785 | -0.851 | 0.989 | N | 0.831 | 0.425 | 0.656511762744 | gnomAD-4.0.0 | 1.59214E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86012E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4637 | ambiguous | 0.4459 | ambiguous | -0.62 | Destabilizing | 0.928 | D | 0.721 | prob.delet. | N | 0.489052782 | None | None | N |
G/C | 0.5391 | ambiguous | 0.4979 | ambiguous | -0.907 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
G/D | 0.2141 | likely_benign | 0.217 | benign | -1.074 | Destabilizing | 0.05 | N | 0.485 | neutral | None | None | None | None | N |
G/E | 0.3338 | likely_benign | 0.3444 | ambiguous | -1.215 | Destabilizing | 0.957 | D | 0.751 | deleterious | N | 0.498927831 | None | None | N |
G/F | 0.8422 | likely_pathogenic | 0.8354 | pathogenic | -1.173 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
G/H | 0.6335 | likely_pathogenic | 0.615 | pathogenic | -0.982 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
G/I | 0.8429 | likely_pathogenic | 0.8348 | pathogenic | -0.576 | Destabilizing | 0.998 | D | 0.83 | deleterious | None | None | None | None | N |
G/K | 0.6531 | likely_pathogenic | 0.6353 | pathogenic | -1.252 | Destabilizing | 0.983 | D | 0.803 | deleterious | None | None | None | None | N |
G/L | 0.7694 | likely_pathogenic | 0.7653 | pathogenic | -0.576 | Destabilizing | 0.992 | D | 0.819 | deleterious | None | None | None | None | N |
G/M | 0.7819 | likely_pathogenic | 0.7615 | pathogenic | -0.464 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
G/N | 0.2694 | likely_benign | 0.2523 | benign | -0.819 | Destabilizing | 0.968 | D | 0.841 | deleterious | None | None | None | None | N |
G/P | 0.9846 | likely_pathogenic | 0.9872 | pathogenic | -0.555 | Destabilizing | 0.992 | D | 0.825 | deleterious | None | None | None | None | N |
G/Q | 0.5117 | ambiguous | 0.5071 | ambiguous | -1.127 | Destabilizing | 0.983 | D | 0.831 | deleterious | None | None | None | None | N |
G/R | 0.5775 | likely_pathogenic | 0.5692 | pathogenic | -0.739 | Destabilizing | 0.989 | D | 0.831 | deleterious | N | 0.516311297 | None | None | N |
G/S | 0.2306 | likely_benign | 0.2194 | benign | -0.969 | Destabilizing | 0.968 | D | 0.823 | deleterious | None | None | None | None | N |
G/T | 0.5423 | ambiguous | 0.5014 | ambiguous | -1.05 | Destabilizing | 0.983 | D | 0.797 | deleterious | None | None | None | None | N |
G/V | 0.7345 | likely_pathogenic | 0.7298 | pathogenic | -0.555 | Destabilizing | 0.989 | D | 0.819 | deleterious | D | 0.539948961 | None | None | N |
G/W | 0.6269 | likely_pathogenic | 0.623 | pathogenic | -1.369 | Destabilizing | 0.999 | D | 0.825 | deleterious | N | 0.481041066 | None | None | N |
G/Y | 0.6758 | likely_pathogenic | 0.6489 | pathogenic | -1.039 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.