Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22517 | 67774;67775;67776 | chr2:178579648;178579647;178579646 | chr2:179444375;179444374;179444373 |
N2AB | 20876 | 62851;62852;62853 | chr2:178579648;178579647;178579646 | chr2:179444375;179444374;179444373 |
N2A | 19949 | 60070;60071;60072 | chr2:178579648;178579647;178579646 | chr2:179444375;179444374;179444373 |
N2B | 13452 | 40579;40580;40581 | chr2:178579648;178579647;178579646 | chr2:179444375;179444374;179444373 |
Novex-1 | 13577 | 40954;40955;40956 | chr2:178579648;178579647;178579646 | chr2:179444375;179444374;179444373 |
Novex-2 | 13644 | 41155;41156;41157 | chr2:178579648;178579647;178579646 | chr2:179444375;179444374;179444373 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.379 | N | 0.408 | 0.106 | 0.293147016451 | gnomAD-4.0.0 | 2.40078E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62516E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3546 | ambiguous | 0.3516 | ambiguous | -0.683 | Destabilizing | 0.447 | N | 0.284 | neutral | None | None | None | None | N |
K/C | 0.6193 | likely_pathogenic | 0.6305 | pathogenic | -0.604 | Destabilizing | 0.992 | D | 0.565 | neutral | None | None | None | None | N |
K/D | 0.5548 | ambiguous | 0.5428 | ambiguous | 0.033 | Stabilizing | 0.447 | N | 0.308 | neutral | None | None | None | None | N |
K/E | 0.145 | likely_benign | 0.1495 | benign | 0.154 | Stabilizing | 0.004 | N | 0.217 | neutral | N | 0.451640521 | None | None | N |
K/F | 0.7621 | likely_pathogenic | 0.7925 | pathogenic | -0.394 | Destabilizing | 0.92 | D | 0.503 | neutral | None | None | None | None | N |
K/G | 0.429 | ambiguous | 0.4356 | ambiguous | -1.034 | Destabilizing | 0.617 | D | 0.402 | neutral | None | None | None | None | N |
K/H | 0.3028 | likely_benign | 0.309 | benign | -1.236 | Destabilizing | 0.012 | N | 0.347 | neutral | None | None | None | None | N |
K/I | 0.3589 | ambiguous | 0.3757 | ambiguous | 0.226 | Stabilizing | 0.92 | D | 0.494 | neutral | None | None | None | None | N |
K/L | 0.3604 | ambiguous | 0.3735 | ambiguous | 0.226 | Stabilizing | 0.617 | D | 0.39 | neutral | None | None | None | None | N |
K/M | 0.2026 | likely_benign | 0.2143 | benign | -0.01 | Destabilizing | 0.97 | D | 0.357 | neutral | N | 0.497508884 | None | None | N |
K/N | 0.3455 | ambiguous | 0.3539 | ambiguous | -0.414 | Destabilizing | 0.549 | D | 0.389 | neutral | N | 0.477384328 | None | None | N |
K/P | 0.9545 | likely_pathogenic | 0.9552 | pathogenic | -0.048 | Destabilizing | 0.92 | D | 0.371 | neutral | None | None | None | None | N |
K/Q | 0.1132 | likely_benign | 0.1145 | benign | -0.418 | Destabilizing | 0.016 | N | 0.183 | neutral | N | 0.478923123 | None | None | N |
K/R | 0.0783 | likely_benign | 0.0801 | benign | -0.47 | Destabilizing | 0.379 | N | 0.408 | neutral | N | 0.460836008 | None | None | N |
K/S | 0.3576 | ambiguous | 0.363 | ambiguous | -1.078 | Destabilizing | 0.447 | N | 0.343 | neutral | None | None | None | None | N |
K/T | 0.1707 | likely_benign | 0.1681 | benign | -0.742 | Destabilizing | 0.549 | D | 0.351 | neutral | N | 0.440743163 | None | None | N |
K/V | 0.3027 | likely_benign | 0.3063 | benign | -0.048 | Destabilizing | 0.85 | D | 0.403 | neutral | None | None | None | None | N |
K/W | 0.7484 | likely_pathogenic | 0.7925 | pathogenic | -0.282 | Destabilizing | 0.992 | D | 0.581 | neutral | None | None | None | None | N |
K/Y | 0.6407 | likely_pathogenic | 0.6632 | pathogenic | -0.007 | Destabilizing | 0.85 | D | 0.427 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.