Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22523 | 67792;67793;67794 | chr2:178579630;178579629;178579628 | chr2:179444357;179444356;179444355 |
N2AB | 20882 | 62869;62870;62871 | chr2:178579630;178579629;178579628 | chr2:179444357;179444356;179444355 |
N2A | 19955 | 60088;60089;60090 | chr2:178579630;178579629;178579628 | chr2:179444357;179444356;179444355 |
N2B | 13458 | 40597;40598;40599 | chr2:178579630;178579629;178579628 | chr2:179444357;179444356;179444355 |
Novex-1 | 13583 | 40972;40973;40974 | chr2:178579630;178579629;178579628 | chr2:179444357;179444356;179444355 |
Novex-2 | 13650 | 41173;41174;41175 | chr2:178579630;178579629;178579628 | chr2:179444357;179444356;179444355 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs1274914285 | -3.267 | 1.0 | D | 0.891 | 0.831 | 0.94499076129 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7607 | likely_pathogenic | 0.846 | pathogenic | -2.337 | Highly Destabilizing | 0.998 | D | 0.665 | neutral | D | 0.53931271 | None | None | N |
V/C | 0.9455 | likely_pathogenic | 0.9623 | pathogenic | -2.02 | Highly Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
V/D | 0.9976 | likely_pathogenic | 0.9984 | pathogenic | -3.313 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
V/E | 0.993 | likely_pathogenic | 0.9952 | pathogenic | -3.023 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | D | 0.62669769 | None | None | N |
V/F | 0.877 | likely_pathogenic | 0.9246 | pathogenic | -1.33 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
V/G | 0.8835 | likely_pathogenic | 0.9315 | pathogenic | -2.944 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.62669769 | None | None | N |
V/H | 0.9978 | likely_pathogenic | 0.9987 | pathogenic | -2.822 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/I | 0.122 | likely_benign | 0.1297 | benign | -0.592 | Destabilizing | 0.813 | D | 0.323 | neutral | None | None | None | None | N |
V/K | 0.9942 | likely_pathogenic | 0.9957 | pathogenic | -1.999 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/L | 0.7353 | likely_pathogenic | 0.7965 | pathogenic | -0.592 | Destabilizing | 0.981 | D | 0.609 | neutral | D | 0.523735988 | None | None | N |
V/M | 0.8066 | likely_pathogenic | 0.8676 | pathogenic | -0.833 | Destabilizing | 0.999 | D | 0.78 | deleterious | D | 0.547959991 | None | None | N |
V/N | 0.9926 | likely_pathogenic | 0.9949 | pathogenic | -2.558 | Highly Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
V/P | 0.9964 | likely_pathogenic | 0.9967 | pathogenic | -1.151 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/Q | 0.9913 | likely_pathogenic | 0.9944 | pathogenic | -2.271 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
V/R | 0.9869 | likely_pathogenic | 0.9908 | pathogenic | -1.979 | Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
V/S | 0.9563 | likely_pathogenic | 0.9734 | pathogenic | -3.142 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/T | 0.9131 | likely_pathogenic | 0.9356 | pathogenic | -2.692 | Highly Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/W | 0.9984 | likely_pathogenic | 0.9992 | pathogenic | -1.944 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
V/Y | 0.9886 | likely_pathogenic | 0.9936 | pathogenic | -1.579 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.