Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22526 | 67801;67802;67803 | chr2:178579621;178579620;178579619 | chr2:179444348;179444347;179444346 |
N2AB | 20885 | 62878;62879;62880 | chr2:178579621;178579620;178579619 | chr2:179444348;179444347;179444346 |
N2A | 19958 | 60097;60098;60099 | chr2:178579621;178579620;178579619 | chr2:179444348;179444347;179444346 |
N2B | 13461 | 40606;40607;40608 | chr2:178579621;178579620;178579619 | chr2:179444348;179444347;179444346 |
Novex-1 | 13586 | 40981;40982;40983 | chr2:178579621;178579620;178579619 | chr2:179444348;179444347;179444346 |
Novex-2 | 13653 | 41182;41183;41184 | chr2:178579621;178579620;178579619 | chr2:179444348;179444347;179444346 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs751993220 | -1.3 | 0.425 | N | 0.401 | 0.081 | 0.21279746466 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 1.15935E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs751993220 | -1.3 | 0.425 | N | 0.401 | 0.081 | 0.21279746466 | gnomAD-4.0.0 | 6.36831E-06 | None | None | None | None | N | None | 0 | 9.14704E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1661 | likely_benign | 0.1836 | benign | -1.2 | Destabilizing | 0.425 | N | 0.301 | neutral | N | 0.465857825 | None | None | N |
E/C | 0.7036 | likely_pathogenic | 0.6919 | pathogenic | -0.784 | Destabilizing | 0.995 | D | 0.549 | neutral | None | None | None | None | N |
E/D | 0.4604 | ambiguous | 0.4761 | ambiguous | -1.527 | Destabilizing | 0.425 | N | 0.401 | neutral | N | 0.466760429 | None | None | N |
E/F | 0.5964 | likely_pathogenic | 0.607 | pathogenic | -1.136 | Destabilizing | 0.704 | D | 0.615 | neutral | None | None | None | None | N |
E/G | 0.2627 | likely_benign | 0.3118 | benign | -1.544 | Destabilizing | 0.642 | D | 0.497 | neutral | N | 0.501722625 | None | None | N |
E/H | 0.4985 | ambiguous | 0.5115 | ambiguous | -1.282 | Destabilizing | 0.944 | D | 0.536 | neutral | None | None | None | None | N |
E/I | 0.1669 | likely_benign | 0.189 | benign | -0.253 | Destabilizing | 0.013 | N | 0.407 | neutral | None | None | None | None | N |
E/K | 0.1182 | likely_benign | 0.1355 | benign | -0.925 | Destabilizing | 0.27 | N | 0.409 | neutral | N | 0.459009211 | None | None | N |
E/L | 0.2563 | likely_benign | 0.2856 | benign | -0.253 | Destabilizing | 0.001 | N | 0.377 | neutral | None | None | None | None | N |
E/M | 0.2698 | likely_benign | 0.2974 | benign | 0.289 | Stabilizing | 0.893 | D | 0.578 | neutral | None | None | None | None | N |
E/N | 0.4841 | ambiguous | 0.5266 | ambiguous | -1.207 | Destabilizing | 0.704 | D | 0.475 | neutral | None | None | None | None | N |
E/P | 0.9801 | likely_pathogenic | 0.9802 | pathogenic | -0.55 | Destabilizing | 0.828 | D | 0.579 | neutral | None | None | None | None | N |
E/Q | 0.1003 | likely_benign | 0.1084 | benign | -1.107 | Destabilizing | 0.01 | N | 0.133 | neutral | N | 0.467647337 | None | None | N |
E/R | 0.194 | likely_benign | 0.2136 | benign | -0.8 | Destabilizing | 0.543 | D | 0.431 | neutral | None | None | None | None | N |
E/S | 0.2638 | likely_benign | 0.2856 | benign | -1.695 | Destabilizing | 0.495 | N | 0.401 | neutral | None | None | None | None | N |
E/T | 0.1927 | likely_benign | 0.2115 | benign | -1.383 | Destabilizing | 0.495 | N | 0.443 | neutral | None | None | None | None | N |
E/V | 0.1122 | likely_benign | 0.1207 | benign | -0.55 | Destabilizing | 0.139 | N | 0.297 | neutral | N | 0.380425423 | None | None | N |
E/W | 0.8449 | likely_pathogenic | 0.8537 | pathogenic | -1.064 | Destabilizing | 0.995 | D | 0.573 | neutral | None | None | None | None | N |
E/Y | 0.5889 | likely_pathogenic | 0.6023 | pathogenic | -0.883 | Destabilizing | 0.981 | D | 0.613 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.