Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22529 | 67810;67811;67812 | chr2:178579612;178579611;178579610 | chr2:179444339;179444338;179444337 |
N2AB | 20888 | 62887;62888;62889 | chr2:178579612;178579611;178579610 | chr2:179444339;179444338;179444337 |
N2A | 19961 | 60106;60107;60108 | chr2:178579612;178579611;178579610 | chr2:179444339;179444338;179444337 |
N2B | 13464 | 40615;40616;40617 | chr2:178579612;178579611;178579610 | chr2:179444339;179444338;179444337 |
Novex-1 | 13589 | 40990;40991;40992 | chr2:178579612;178579611;178579610 | chr2:179444339;179444338;179444337 |
Novex-2 | 13656 | 41191;41192;41193 | chr2:178579612;178579611;178579610 | chr2:179444339;179444338;179444337 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.003 | N | 0.17 | 0.156 | 0.202949470691 | gnomAD-4.0.0 | 4.1062E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39796E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.151 | likely_benign | 0.166 | benign | -0.299 | Destabilizing | 0.001 | N | 0.273 | neutral | None | None | None | None | I |
N/C | 0.1775 | likely_benign | 0.1797 | benign | 0.332 | Stabilizing | 0.944 | D | 0.533 | neutral | None | None | None | None | I |
N/D | 0.2525 | likely_benign | 0.2751 | benign | -0.064 | Destabilizing | 0.425 | N | 0.297 | neutral | N | 0.487657249 | None | None | I |
N/E | 0.3537 | ambiguous | 0.4109 | ambiguous | -0.127 | Destabilizing | 0.495 | N | 0.286 | neutral | None | None | None | None | I |
N/F | 0.3092 | likely_benign | 0.386 | ambiguous | -0.807 | Destabilizing | 0.944 | D | 0.549 | neutral | None | None | None | None | I |
N/G | 0.2935 | likely_benign | 0.3121 | benign | -0.417 | Destabilizing | 0.176 | N | 0.217 | neutral | None | None | None | None | I |
N/H | 0.0916 | likely_benign | 0.1032 | benign | -0.48 | Destabilizing | 0.975 | D | 0.344 | neutral | N | 0.40663895 | None | None | I |
N/I | 0.1362 | likely_benign | 0.1606 | benign | -0.081 | Destabilizing | 0.642 | D | 0.525 | neutral | N | 0.378548272 | None | None | I |
N/K | 0.213 | likely_benign | 0.2531 | benign | 0.164 | Stabilizing | 0.425 | N | 0.286 | neutral | N | 0.422413692 | None | None | I |
N/L | 0.1933 | likely_benign | 0.2275 | benign | -0.081 | Destabilizing | 0.495 | N | 0.538 | neutral | None | None | None | None | I |
N/M | 0.2043 | likely_benign | 0.2341 | benign | 0.321 | Stabilizing | 0.981 | D | 0.537 | neutral | None | None | None | None | I |
N/P | 0.8965 | likely_pathogenic | 0.9072 | pathogenic | -0.13 | Destabilizing | 0.828 | D | 0.541 | neutral | None | None | None | None | I |
N/Q | 0.2448 | likely_benign | 0.2831 | benign | -0.318 | Destabilizing | 0.828 | D | 0.325 | neutral | None | None | None | None | I |
N/R | 0.2323 | likely_benign | 0.2767 | benign | 0.287 | Stabilizing | 0.704 | D | 0.255 | neutral | None | None | None | None | I |
N/S | 0.0941 | likely_benign | 0.1003 | benign | -0.012 | Destabilizing | 0.003 | N | 0.17 | neutral | N | 0.361578664 | None | None | I |
N/T | 0.1295 | likely_benign | 0.1333 | benign | 0.045 | Stabilizing | 0.27 | N | 0.279 | neutral | N | 0.45881721 | None | None | I |
N/V | 0.1475 | likely_benign | 0.1704 | benign | -0.13 | Destabilizing | 0.543 | D | 0.515 | neutral | None | None | None | None | I |
N/W | 0.6549 | likely_pathogenic | 0.7281 | pathogenic | -0.831 | Destabilizing | 0.995 | D | 0.553 | neutral | None | None | None | None | I |
N/Y | 0.0944 | likely_benign | 0.1091 | benign | -0.549 | Destabilizing | 0.975 | D | 0.531 | neutral | N | 0.367389916 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.