Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2253 | 6982;6983;6984 | chr2:178774954;178774953;178774952 | chr2:179639681;179639680;179639679 |
N2AB | 2253 | 6982;6983;6984 | chr2:178774954;178774953;178774952 | chr2:179639681;179639680;179639679 |
N2A | 2253 | 6982;6983;6984 | chr2:178774954;178774953;178774952 | chr2:179639681;179639680;179639679 |
N2B | 2207 | 6844;6845;6846 | chr2:178774954;178774953;178774952 | chr2:179639681;179639680;179639679 |
Novex-1 | 2207 | 6844;6845;6846 | chr2:178774954;178774953;178774952 | chr2:179639681;179639680;179639679 |
Novex-2 | 2207 | 6844;6845;6846 | chr2:178774954;178774953;178774952 | chr2:179639681;179639680;179639679 |
Novex-3 | 2253 | 6982;6983;6984 | chr2:178774954;178774953;178774952 | chr2:179639681;179639680;179639679 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1296864074 | -0.188 | 0.183 | N | 0.324 | 0.114 | 0.0611884634855 | gnomAD-2.1.1 | 7.97E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.09051E-04 | None | 0 | None | 0 | 0 | 0 |
N/K | rs1296864074 | -0.188 | 0.183 | N | 0.324 | 0.114 | 0.0611884634855 | gnomAD-4.0.0 | 3.18242E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.55247E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1115 | likely_benign | 0.1119 | benign | -0.059 | Destabilizing | 0.129 | N | 0.589 | neutral | None | None | None | None | N |
N/C | 0.2325 | likely_benign | 0.2358 | benign | 0.207 | Stabilizing | 0.983 | D | 0.629 | neutral | None | None | None | None | N |
N/D | 0.0988 | likely_benign | 0.0981 | benign | 0.077 | Stabilizing | 0.002 | N | 0.118 | neutral | N | 0.454284187 | None | None | N |
N/E | 0.181 | likely_benign | 0.1826 | benign | 0.019 | Stabilizing | 0.01 | N | 0.131 | neutral | None | None | None | None | N |
N/F | 0.2949 | likely_benign | 0.3064 | benign | -0.63 | Destabilizing | 0.836 | D | 0.649 | neutral | None | None | None | None | N |
N/G | 0.1593 | likely_benign | 0.1652 | benign | -0.164 | Destabilizing | 0.129 | N | 0.367 | neutral | None | None | None | None | N |
N/H | 0.0877 | likely_benign | 0.0884 | benign | -0.182 | Destabilizing | 0.004 | N | 0.255 | neutral | N | 0.435036471 | None | None | N |
N/I | 0.1502 | likely_benign | 0.1514 | benign | 0.119 | Stabilizing | 0.794 | D | 0.642 | neutral | N | 0.51019007 | None | None | N |
N/K | 0.1427 | likely_benign | 0.1479 | benign | 0.1 | Stabilizing | 0.183 | N | 0.324 | neutral | N | 0.427814228 | None | None | N |
N/L | 0.1468 | likely_benign | 0.1521 | benign | 0.119 | Stabilizing | 0.418 | N | 0.593 | neutral | None | None | None | None | N |
N/M | 0.1759 | likely_benign | 0.1753 | benign | 0.156 | Stabilizing | 0.983 | D | 0.611 | neutral | None | None | None | None | N |
N/P | 0.5554 | ambiguous | 0.5809 | pathogenic | 0.083 | Stabilizing | 0.836 | D | 0.592 | neutral | None | None | None | None | N |
N/Q | 0.1719 | likely_benign | 0.1794 | benign | -0.222 | Destabilizing | 0.418 | N | 0.399 | neutral | None | None | None | None | N |
N/R | 0.1757 | likely_benign | 0.1905 | benign | 0.172 | Stabilizing | 0.418 | N | 0.399 | neutral | None | None | None | None | N |
N/S | 0.0689 | likely_benign | 0.0689 | benign | -0.003 | Destabilizing | 0.001 | N | 0.111 | neutral | N | 0.403529946 | None | None | N |
N/T | 0.0762 | likely_benign | 0.0747 | benign | 0.05 | Stabilizing | 0.101 | N | 0.337 | neutral | N | 0.450445291 | None | None | N |
N/V | 0.1537 | likely_benign | 0.1532 | benign | 0.083 | Stabilizing | 0.418 | N | 0.59 | neutral | None | None | None | None | N |
N/W | 0.5526 | ambiguous | 0.5666 | pathogenic | -0.766 | Destabilizing | 0.983 | D | 0.656 | neutral | None | None | None | None | N |
N/Y | 0.1164 | likely_benign | 0.12 | benign | -0.441 | Destabilizing | 0.655 | D | 0.631 | neutral | N | 0.51019007 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.