Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22536 | 67831;67832;67833 | chr2:178579591;178579590;178579589 | chr2:179444318;179444317;179444316 |
N2AB | 20895 | 62908;62909;62910 | chr2:178579591;178579590;178579589 | chr2:179444318;179444317;179444316 |
N2A | 19968 | 60127;60128;60129 | chr2:178579591;178579590;178579589 | chr2:179444318;179444317;179444316 |
N2B | 13471 | 40636;40637;40638 | chr2:178579591;178579590;178579589 | chr2:179444318;179444317;179444316 |
Novex-1 | 13596 | 41011;41012;41013 | chr2:178579591;178579590;178579589 | chr2:179444318;179444317;179444316 |
Novex-2 | 13663 | 41212;41213;41214 | chr2:178579591;178579590;178579589 | chr2:179444318;179444317;179444316 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs371105318 | 0.044 | 1.0 | N | 0.8 | 0.315 | None | gnomAD-2.1.1 | 2.15E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.14E-05 | None | 0 | None | 0 | 3.93E-05 | 0 |
E/K | rs371105318 | 0.044 | 1.0 | N | 0.8 | 0.315 | None | gnomAD-3.1.2 | 5.92E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.17699E-04 | 0 | 0 |
E/K | rs371105318 | 0.044 | 1.0 | N | 0.8 | 0.315 | None | gnomAD-4.0.0 | 3.78144E-05 | None | None | None | None | N | None | 1.33529E-05 | 0 | None | 0 | 4.46229E-05 | None | 0 | 0 | 4.83262E-05 | 0 | 1.60164E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2432 | likely_benign | 0.2415 | benign | -0.78 | Destabilizing | 0.997 | D | 0.804 | deleterious | N | 0.504818858 | None | None | N |
E/C | 0.8886 | likely_pathogenic | 0.8734 | pathogenic | -0.413 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/D | 0.2559 | likely_benign | 0.2652 | benign | -0.875 | Destabilizing | 0.997 | D | 0.739 | deleterious | N | 0.4777469 | None | None | N |
E/F | 0.7912 | likely_pathogenic | 0.8118 | pathogenic | -0.015 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/G | 0.307 | likely_benign | 0.3276 | benign | -1.142 | Destabilizing | 0.999 | D | 0.735 | deleterious | N | 0.468037422 | None | None | N |
E/H | 0.5467 | ambiguous | 0.5645 | pathogenic | -0.064 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
E/I | 0.3932 | ambiguous | 0.4164 | ambiguous | 0.209 | Stabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
E/K | 0.1922 | likely_benign | 0.2271 | benign | -0.289 | Destabilizing | 1.0 | D | 0.8 | deleterious | N | 0.521153748 | None | None | N |
E/L | 0.4832 | ambiguous | 0.4972 | ambiguous | 0.209 | Stabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
E/M | 0.4773 | ambiguous | 0.4935 | ambiguous | 0.513 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
E/N | 0.3817 | ambiguous | 0.3987 | ambiguous | -0.949 | Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | N |
E/P | 0.83 | likely_pathogenic | 0.8216 | pathogenic | -0.099 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | N |
E/Q | 0.1606 | likely_benign | 0.1659 | benign | -0.795 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.513168983 | None | None | N |
E/R | 0.3242 | likely_benign | 0.3694 | ambiguous | 0.082 | Stabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
E/S | 0.281 | likely_benign | 0.2793 | benign | -1.211 | Destabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | N |
E/T | 0.2463 | likely_benign | 0.2475 | benign | -0.896 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | N |
E/V | 0.2333 | likely_benign | 0.2388 | benign | -0.099 | Destabilizing | 0.999 | D | 0.773 | deleterious | D | 0.523810051 | None | None | N |
E/W | 0.9316 | likely_pathogenic | 0.9424 | pathogenic | 0.334 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/Y | 0.7073 | likely_pathogenic | 0.7418 | pathogenic | 0.278 | Stabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.