Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22543 | 67852;67853;67854 | chr2:178579570;178579569;178579568 | chr2:179444297;179444296;179444295 |
N2AB | 20902 | 62929;62930;62931 | chr2:178579570;178579569;178579568 | chr2:179444297;179444296;179444295 |
N2A | 19975 | 60148;60149;60150 | chr2:178579570;178579569;178579568 | chr2:179444297;179444296;179444295 |
N2B | 13478 | 40657;40658;40659 | chr2:178579570;178579569;178579568 | chr2:179444297;179444296;179444295 |
Novex-1 | 13603 | 41032;41033;41034 | chr2:178579570;178579569;178579568 | chr2:179444297;179444296;179444295 |
Novex-2 | 13670 | 41233;41234;41235 | chr2:178579570;178579569;178579568 | chr2:179444297;179444296;179444295 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1283302985 | 0.333 | 1.0 | N | 0.808 | 0.397 | 0.39843156188 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs1283302985 | 0.333 | 1.0 | N | 0.808 | 0.397 | 0.39843156188 | gnomAD-4.0.0 | 6.5767E-06 | None | None | None | None | N | None | 2.41324E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6141 | likely_pathogenic | 0.6254 | pathogenic | -0.182 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.481805216 | None | None | N |
D/C | 0.931 | likely_pathogenic | 0.9423 | pathogenic | 0.092 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
D/E | 0.3623 | ambiguous | 0.3441 | ambiguous | -0.286 | Destabilizing | 0.999 | D | 0.517 | neutral | N | 0.481433071 | None | None | N |
D/F | 0.9597 | likely_pathogenic | 0.9638 | pathogenic | -0.246 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
D/G | 0.5001 | ambiguous | 0.5207 | ambiguous | -0.354 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.504682411 | None | None | N |
D/H | 0.7983 | likely_pathogenic | 0.825 | pathogenic | -0.066 | Destabilizing | 1.0 | D | 0.884 | deleterious | N | 0.505949859 | None | None | N |
D/I | 0.895 | likely_pathogenic | 0.9001 | pathogenic | 0.213 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
D/K | 0.8547 | likely_pathogenic | 0.858 | pathogenic | 0.341 | Stabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
D/L | 0.8669 | likely_pathogenic | 0.8718 | pathogenic | 0.213 | Stabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
D/M | 0.942 | likely_pathogenic | 0.9432 | pathogenic | 0.316 | Stabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
D/N | 0.2593 | likely_benign | 0.2589 | benign | 0.144 | Stabilizing | 1.0 | D | 0.808 | deleterious | N | 0.491805168 | None | None | N |
D/P | 0.9269 | likely_pathogenic | 0.9408 | pathogenic | 0.103 | Stabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
D/Q | 0.815 | likely_pathogenic | 0.8185 | pathogenic | 0.156 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
D/R | 0.8941 | likely_pathogenic | 0.9002 | pathogenic | 0.469 | Stabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
D/S | 0.4509 | ambiguous | 0.4586 | ambiguous | 0.033 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
D/T | 0.7283 | likely_pathogenic | 0.7269 | pathogenic | 0.161 | Stabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
D/V | 0.7483 | likely_pathogenic | 0.7559 | pathogenic | 0.103 | Stabilizing | 1.0 | D | 0.805 | deleterious | N | 0.505949859 | None | None | N |
D/W | 0.9853 | likely_pathogenic | 0.988 | pathogenic | -0.169 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
D/Y | 0.736 | likely_pathogenic | 0.7558 | pathogenic | -0.023 | Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.506203348 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.