Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2255 | 6988;6989;6990 | chr2:178774948;178774947;178774946 | chr2:179639675;179639674;179639673 |
N2AB | 2255 | 6988;6989;6990 | chr2:178774948;178774947;178774946 | chr2:179639675;179639674;179639673 |
N2A | 2255 | 6988;6989;6990 | chr2:178774948;178774947;178774946 | chr2:179639675;179639674;179639673 |
N2B | 2209 | 6850;6851;6852 | chr2:178774948;178774947;178774946 | chr2:179639675;179639674;179639673 |
Novex-1 | 2209 | 6850;6851;6852 | chr2:178774948;178774947;178774946 | chr2:179639675;179639674;179639673 |
Novex-2 | 2209 | 6850;6851;6852 | chr2:178774948;178774947;178774946 | chr2:179639675;179639674;179639673 |
Novex-3 | 2255 | 6988;6989;6990 | chr2:178774948;178774947;178774946 | chr2:179639675;179639674;179639673 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.722 | N | 0.579 | 0.174 | 0.236890367714 | gnomAD-4.0.0 | 3.43349E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.55872E-05 | None | 1.91549E-05 | 0 | 9.01554E-07 | 0 | 3.33356E-05 |
K/R | None | None | 0.003 | N | 0.257 | 0.114 | 0.282179105231 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85753E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3404 | ambiguous | 0.3733 | ambiguous | -0.4 | Destabilizing | 0.775 | D | 0.648 | neutral | None | None | None | None | N |
K/C | 0.5953 | likely_pathogenic | 0.598 | pathogenic | -0.469 | Destabilizing | 0.996 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/D | 0.7467 | likely_pathogenic | 0.7708 | pathogenic | 0.312 | Stabilizing | 0.923 | D | 0.665 | neutral | None | None | None | None | N |
K/E | 0.1815 | likely_benign | 0.2039 | benign | 0.387 | Stabilizing | 0.722 | D | 0.636 | neutral | N | 0.501858914 | None | None | N |
K/F | 0.6832 | likely_pathogenic | 0.7084 | pathogenic | -0.291 | Destabilizing | 0.987 | D | 0.688 | prob.neutral | None | None | None | None | N |
K/G | 0.5208 | ambiguous | 0.5548 | ambiguous | -0.705 | Destabilizing | 0.775 | D | 0.599 | neutral | None | None | None | None | N |
K/H | 0.2496 | likely_benign | 0.2518 | benign | -0.979 | Destabilizing | 0.961 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/I | 0.3402 | ambiguous | 0.3672 | ambiguous | 0.36 | Stabilizing | 0.949 | D | 0.688 | prob.neutral | D | 0.545835267 | None | None | N |
K/L | 0.3422 | ambiguous | 0.362 | ambiguous | 0.36 | Stabilizing | 0.775 | D | 0.599 | neutral | None | None | None | None | N |
K/M | 0.2055 | likely_benign | 0.2209 | benign | 0.175 | Stabilizing | 0.996 | D | 0.659 | neutral | None | None | None | None | N |
K/N | 0.4711 | ambiguous | 0.5009 | ambiguous | -0.087 | Destabilizing | 0.722 | D | 0.579 | neutral | N | 0.509191112 | None | None | N |
K/P | 0.8983 | likely_pathogenic | 0.9126 | pathogenic | 0.137 | Stabilizing | 0.961 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/Q | 0.1091 | likely_benign | 0.1144 | benign | -0.196 | Destabilizing | 0.722 | D | 0.61 | neutral | N | 0.509237744 | None | None | N |
K/R | 0.0749 | likely_benign | 0.0751 | benign | -0.263 | Destabilizing | 0.003 | N | 0.257 | neutral | N | 0.474892086 | None | None | N |
K/S | 0.3724 | ambiguous | 0.3999 | ambiguous | -0.774 | Destabilizing | 0.775 | D | 0.563 | neutral | None | None | None | None | N |
K/T | 0.15 | likely_benign | 0.1633 | benign | -0.503 | Destabilizing | 0.722 | D | 0.633 | neutral | N | 0.48390903 | None | None | N |
K/V | 0.3089 | likely_benign | 0.3273 | benign | 0.137 | Stabilizing | 0.923 | D | 0.629 | neutral | None | None | None | None | N |
K/W | 0.695 | likely_pathogenic | 0.7196 | pathogenic | -0.171 | Destabilizing | 0.996 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/Y | 0.5647 | likely_pathogenic | 0.5883 | pathogenic | 0.14 | Stabilizing | 0.987 | D | 0.694 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.