Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22565 | 67918;67919;67920 | chr2:178579337;178579336;178579335 | chr2:179444064;179444063;179444062 |
N2AB | 20924 | 62995;62996;62997 | chr2:178579337;178579336;178579335 | chr2:179444064;179444063;179444062 |
N2A | 19997 | 60214;60215;60216 | chr2:178579337;178579336;178579335 | chr2:179444064;179444063;179444062 |
N2B | 13500 | 40723;40724;40725 | chr2:178579337;178579336;178579335 | chr2:179444064;179444063;179444062 |
Novex-1 | 13625 | 41098;41099;41100 | chr2:178579337;178579336;178579335 | chr2:179444064;179444063;179444062 |
Novex-2 | 13692 | 41299;41300;41301 | chr2:178579337;178579336;178579335 | chr2:179444064;179444063;179444062 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.946 | N | 0.49 | 0.258 | 0.170165803431 | gnomAD-4.0.0 | 6.87856E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.74764E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2913 | likely_benign | 0.2657 | benign | -0.359 | Destabilizing | 0.702 | D | 0.557 | neutral | None | None | None | None | I |
N/C | 0.3925 | ambiguous | 0.3446 | ambiguous | 0.421 | Stabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | I |
N/D | 0.1448 | likely_benign | 0.1382 | benign | -0.236 | Destabilizing | 0.946 | D | 0.455 | neutral | N | 0.450094231 | None | None | I |
N/E | 0.4037 | ambiguous | 0.379 | ambiguous | -0.277 | Destabilizing | 0.959 | D | 0.491 | neutral | None | None | None | None | I |
N/F | 0.6336 | likely_pathogenic | 0.588 | pathogenic | -0.737 | Destabilizing | 0.996 | D | 0.638 | neutral | None | None | None | None | I |
N/G | 0.1638 | likely_benign | 0.1524 | benign | -0.531 | Destabilizing | 0.005 | N | 0.251 | neutral | None | None | None | None | I |
N/H | 0.129 | likely_benign | 0.1191 | benign | -0.625 | Destabilizing | 0.995 | D | 0.532 | neutral | N | 0.485497671 | None | None | I |
N/I | 0.4721 | ambiguous | 0.4206 | ambiguous | 0.007 | Stabilizing | 0.995 | D | 0.632 | neutral | N | 0.504526149 | None | None | I |
N/K | 0.245 | likely_benign | 0.2198 | benign | 0.06 | Stabilizing | 0.946 | D | 0.49 | neutral | N | 0.46046594 | None | None | I |
N/L | 0.4205 | ambiguous | 0.3925 | ambiguous | 0.007 | Stabilizing | 0.988 | D | 0.635 | neutral | None | None | None | None | I |
N/M | 0.4459 | ambiguous | 0.4249 | ambiguous | 0.537 | Stabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | I |
N/P | 0.9088 | likely_pathogenic | 0.8859 | pathogenic | -0.089 | Destabilizing | 0.996 | D | 0.613 | neutral | None | None | None | None | I |
N/Q | 0.3128 | likely_benign | 0.2842 | benign | -0.454 | Destabilizing | 0.996 | D | 0.494 | neutral | None | None | None | None | I |
N/R | 0.3484 | ambiguous | 0.2972 | benign | 0.176 | Stabilizing | 0.988 | D | 0.487 | neutral | None | None | None | None | I |
N/S | 0.1288 | likely_benign | 0.1154 | benign | -0.132 | Destabilizing | 0.78 | D | 0.468 | neutral | N | 0.43703172 | None | None | I |
N/T | 0.2255 | likely_benign | 0.1987 | benign | -0.041 | Destabilizing | 0.946 | D | 0.492 | neutral | N | 0.485324312 | None | None | I |
N/V | 0.4607 | ambiguous | 0.419 | ambiguous | -0.089 | Destabilizing | 0.988 | D | 0.623 | neutral | None | None | None | None | I |
N/W | 0.815 | likely_pathogenic | 0.7968 | pathogenic | -0.705 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | I |
N/Y | 0.1907 | likely_benign | 0.1661 | benign | -0.446 | Destabilizing | 0.995 | D | 0.626 | neutral | N | 0.485671029 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.