Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22571 | 67936;67937;67938 | chr2:178579319;178579318;178579317 | chr2:179444046;179444045;179444044 |
N2AB | 20930 | 63013;63014;63015 | chr2:178579319;178579318;178579317 | chr2:179444046;179444045;179444044 |
N2A | 20003 | 60232;60233;60234 | chr2:178579319;178579318;178579317 | chr2:179444046;179444045;179444044 |
N2B | 13506 | 40741;40742;40743 | chr2:178579319;178579318;178579317 | chr2:179444046;179444045;179444044 |
Novex-1 | 13631 | 41116;41117;41118 | chr2:178579319;178579318;178579317 | chr2:179444046;179444045;179444044 |
Novex-2 | 13698 | 41317;41318;41319 | chr2:178579319;178579318;178579317 | chr2:179444046;179444045;179444044 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | None | None | 1.0 | N | 0.581 | 0.589 | 0.488477830397 | gnomAD-4.0.0 | 1.60181E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43724E-05 | 0 |
K/N | None | None | 0.122 | N | 0.251 | 0.17 | 0.210429274316 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5363 | ambiguous | 0.4541 | ambiguous | -0.346 | Destabilizing | 0.985 | D | 0.508 | neutral | None | None | None | None | I |
K/C | 0.7783 | likely_pathogenic | 0.7448 | pathogenic | -0.406 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
K/D | 0.692 | likely_pathogenic | 0.6242 | pathogenic | -0.086 | Destabilizing | 0.942 | D | 0.499 | neutral | None | None | None | None | I |
K/E | 0.3509 | ambiguous | 0.2864 | benign | -0.014 | Destabilizing | 0.961 | D | 0.48 | neutral | N | 0.456481486 | None | None | I |
K/F | 0.8933 | likely_pathogenic | 0.8502 | pathogenic | -0.191 | Destabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | I |
K/G | 0.7072 | likely_pathogenic | 0.6388 | pathogenic | -0.67 | Destabilizing | 0.97 | D | 0.518 | neutral | None | None | None | None | I |
K/H | 0.342 | ambiguous | 0.3167 | benign | -1.082 | Destabilizing | 0.996 | D | 0.589 | neutral | None | None | None | None | I |
K/I | 0.5089 | ambiguous | 0.4169 | ambiguous | 0.468 | Stabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | I |
K/L | 0.5337 | ambiguous | 0.4575 | ambiguous | 0.468 | Stabilizing | 0.985 | D | 0.5 | neutral | None | None | None | None | I |
K/M | 0.3537 | ambiguous | 0.2845 | benign | 0.335 | Stabilizing | 1.0 | D | 0.581 | neutral | N | 0.495976359 | None | None | I |
K/N | 0.4962 | ambiguous | 0.4269 | ambiguous | -0.266 | Destabilizing | 0.122 | N | 0.251 | neutral | N | 0.46829599 | None | None | I |
K/P | 0.788 | likely_pathogenic | 0.7638 | pathogenic | 0.228 | Stabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | I |
K/Q | 0.1736 | likely_benign | 0.1537 | benign | -0.379 | Destabilizing | 0.994 | D | 0.491 | neutral | N | 0.499888333 | None | None | I |
K/R | 0.1009 | likely_benign | 0.1024 | benign | -0.545 | Destabilizing | 0.98 | D | 0.437 | neutral | N | 0.511625479 | None | None | I |
K/S | 0.5478 | ambiguous | 0.4678 | ambiguous | -0.844 | Destabilizing | 0.97 | D | 0.466 | neutral | None | None | None | None | I |
K/T | 0.244 | likely_benign | 0.1847 | benign | -0.582 | Destabilizing | 0.961 | D | 0.523 | neutral | N | 0.478184909 | None | None | I |
K/V | 0.4477 | ambiguous | 0.3692 | ambiguous | 0.228 | Stabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | I |
K/W | 0.863 | likely_pathogenic | 0.8385 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
K/Y | 0.769 | likely_pathogenic | 0.7162 | pathogenic | 0.196 | Stabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.