Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22573 | 67942;67943;67944 | chr2:178579313;178579312;178579311 | chr2:179444040;179444039;179444038 |
N2AB | 20932 | 63019;63020;63021 | chr2:178579313;178579312;178579311 | chr2:179444040;179444039;179444038 |
N2A | 20005 | 60238;60239;60240 | chr2:178579313;178579312;178579311 | chr2:179444040;179444039;179444038 |
N2B | 13508 | 40747;40748;40749 | chr2:178579313;178579312;178579311 | chr2:179444040;179444039;179444038 |
Novex-1 | 13633 | 41122;41123;41124 | chr2:178579313;178579312;178579311 | chr2:179444040;179444039;179444038 |
Novex-2 | 13700 | 41323;41324;41325 | chr2:178579313;178579312;178579311 | chr2:179444040;179444039;179444038 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs767245563 | -0.375 | 1.0 | D | 0.749 | 0.385 | 0.482721949076 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 1.0012E-04 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs767245563 | -0.375 | 1.0 | D | 0.749 | 0.385 | 0.482721949076 | gnomAD-4.0.0 | 1.60013E-06 | None | None | None | None | I | None | 0 | 0 | None | 4.78469E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2338 | likely_benign | 0.192 | benign | -0.739 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.487374623 | None | None | I |
P/C | 0.8327 | likely_pathogenic | 0.8124 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
P/D | 0.8506 | likely_pathogenic | 0.788 | pathogenic | -0.713 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
P/E | 0.7405 | likely_pathogenic | 0.6523 | pathogenic | -0.8 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/F | 0.8675 | likely_pathogenic | 0.8189 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
P/G | 0.6833 | likely_pathogenic | 0.6105 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
P/H | 0.6218 | likely_pathogenic | 0.5579 | ambiguous | -0.42 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.499998376 | None | None | I |
P/I | 0.6748 | likely_pathogenic | 0.6234 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
P/K | 0.767 | likely_pathogenic | 0.6905 | pathogenic | -0.776 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
P/L | 0.3304 | likely_benign | 0.2801 | benign | -0.402 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.50321438 | None | None | I |
P/M | 0.6944 | likely_pathogenic | 0.6326 | pathogenic | -0.44 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
P/N | 0.7357 | likely_pathogenic | 0.6676 | pathogenic | -0.515 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
P/Q | 0.5348 | ambiguous | 0.4465 | ambiguous | -0.751 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
P/R | 0.5797 | likely_pathogenic | 0.5 | ambiguous | -0.192 | Destabilizing | 1.0 | D | 0.744 | deleterious | N | 0.521762328 | None | None | I |
P/S | 0.3939 | ambiguous | 0.3306 | benign | -0.859 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.530112453 | None | None | I |
P/T | 0.3578 | ambiguous | 0.3087 | benign | -0.848 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.477838289 | None | None | I |
P/V | 0.5208 | ambiguous | 0.4759 | ambiguous | -0.48 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
P/W | 0.9348 | likely_pathogenic | 0.9081 | pathogenic | -0.887 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
P/Y | 0.8602 | likely_pathogenic | 0.8132 | pathogenic | -0.613 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.