Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22583 | 67972;67973;67974 | chr2:178579283;178579282;178579281 | chr2:179444010;179444009;179444008 |
N2AB | 20942 | 63049;63050;63051 | chr2:178579283;178579282;178579281 | chr2:179444010;179444009;179444008 |
N2A | 20015 | 60268;60269;60270 | chr2:178579283;178579282;178579281 | chr2:179444010;179444009;179444008 |
N2B | 13518 | 40777;40778;40779 | chr2:178579283;178579282;178579281 | chr2:179444010;179444009;179444008 |
Novex-1 | 13643 | 41152;41153;41154 | chr2:178579283;178579282;178579281 | chr2:179444010;179444009;179444008 |
Novex-2 | 13710 | 41353;41354;41355 | chr2:178579283;178579282;178579281 | chr2:179444010;179444009;179444008 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.295 | D | 0.578 | 0.273 | 0.545739167163 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0891 | likely_benign | 0.085 | benign | -0.543 | Destabilizing | 0.005 | N | 0.365 | neutral | D | 0.538025434 | None | None | N |
S/C | 0.0905 | likely_benign | 0.0935 | benign | -0.464 | Destabilizing | 0.295 | N | 0.527 | neutral | N | 0.499956513 | None | None | N |
S/D | 0.348 | ambiguous | 0.3086 | benign | -0.023 | Destabilizing | 0.072 | N | 0.357 | neutral | None | None | None | None | N |
S/E | 0.3927 | ambiguous | 0.3499 | ambiguous | -0.029 | Destabilizing | 0.072 | N | 0.34 | neutral | None | None | None | None | N |
S/F | 0.1254 | likely_benign | 0.107 | benign | -0.831 | Destabilizing | 0.055 | N | 0.581 | neutral | D | 0.535545276 | None | None | N |
S/G | 0.1203 | likely_benign | 0.1195 | benign | -0.775 | Destabilizing | 0.031 | N | 0.326 | neutral | None | None | None | None | N |
S/H | 0.2361 | likely_benign | 0.2259 | benign | -1.213 | Destabilizing | 0.628 | D | 0.521 | neutral | None | None | None | None | N |
S/I | 0.0904 | likely_benign | 0.0805 | benign | -0.042 | Destabilizing | None | N | 0.299 | neutral | None | None | None | None | N |
S/K | 0.5506 | ambiguous | 0.4888 | ambiguous | -0.58 | Destabilizing | 0.072 | N | 0.343 | neutral | None | None | None | None | N |
S/L | 0.0739 | likely_benign | 0.0695 | benign | -0.042 | Destabilizing | None | N | 0.301 | neutral | None | None | None | None | N |
S/M | 0.1228 | likely_benign | 0.1152 | benign | 0.023 | Stabilizing | 0.214 | N | 0.525 | neutral | None | None | None | None | N |
S/N | 0.1192 | likely_benign | 0.1101 | benign | -0.605 | Destabilizing | 0.072 | N | 0.372 | neutral | None | None | None | None | N |
S/P | 0.8838 | likely_pathogenic | 0.8583 | pathogenic | -0.175 | Destabilizing | 0.106 | N | 0.532 | neutral | N | 0.517389205 | None | None | N |
S/Q | 0.3602 | ambiguous | 0.3251 | benign | -0.684 | Destabilizing | 0.356 | N | 0.451 | neutral | None | None | None | None | N |
S/R | 0.4562 | ambiguous | 0.3993 | ambiguous | -0.489 | Destabilizing | 0.072 | N | 0.539 | neutral | None | None | None | None | N |
S/T | 0.0565 | likely_benign | 0.0544 | benign | -0.58 | Destabilizing | None | N | 0.135 | neutral | N | 0.421873054 | None | None | N |
S/V | 0.1069 | likely_benign | 0.0983 | benign | -0.175 | Destabilizing | 0.007 | N | 0.428 | neutral | None | None | None | None | N |
S/W | 0.2737 | likely_benign | 0.2524 | benign | -0.865 | Destabilizing | 0.864 | D | 0.581 | neutral | None | None | None | None | N |
S/Y | 0.1528 | likely_benign | 0.1403 | benign | -0.559 | Destabilizing | 0.295 | N | 0.578 | neutral | D | 0.531774252 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.