Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22585 | 67978;67979;67980 | chr2:178579277;178579276;178579275 | chr2:179444004;179444003;179444002 |
N2AB | 20944 | 63055;63056;63057 | chr2:178579277;178579276;178579275 | chr2:179444004;179444003;179444002 |
N2A | 20017 | 60274;60275;60276 | chr2:178579277;178579276;178579275 | chr2:179444004;179444003;179444002 |
N2B | 13520 | 40783;40784;40785 | chr2:178579277;178579276;178579275 | chr2:179444004;179444003;179444002 |
Novex-1 | 13645 | 41158;41159;41160 | chr2:178579277;178579276;178579275 | chr2:179444004;179444003;179444002 |
Novex-2 | 13712 | 41359;41360;41361 | chr2:178579277;178579276;178579275 | chr2:179444004;179444003;179444002 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs2047135173 | None | 1.0 | N | 0.741 | 0.337 | 0.163833314356 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/R | None | None | 0.999 | N | 0.543 | 0.224 | 0.197625483188 | gnomAD-4.0.0 | 1.36881E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79929E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5632 | ambiguous | 0.5643 | pathogenic | -0.849 | Destabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | N |
K/C | 0.6582 | likely_pathogenic | 0.6452 | pathogenic | -1.252 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/D | 0.8377 | likely_pathogenic | 0.8281 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
K/E | 0.2889 | likely_benign | 0.3044 | benign | -0.857 | Destabilizing | 0.999 | D | 0.603 | neutral | N | 0.482605641 | None | None | N |
K/F | 0.7001 | likely_pathogenic | 0.6848 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/G | 0.673 | likely_pathogenic | 0.649 | pathogenic | -1.226 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/H | 0.327 | likely_benign | 0.3054 | benign | -1.622 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/I | 0.3385 | likely_benign | 0.3406 | ambiguous | 0.145 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
K/L | 0.3149 | likely_benign | 0.3194 | benign | 0.145 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/M | 0.1945 | likely_benign | 0.1989 | benign | 0.016 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.505423786 | None | None | N |
K/N | 0.5889 | likely_pathogenic | 0.563 | ambiguous | -1.031 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.467288682 | None | None | N |
K/P | 0.9891 | likely_pathogenic | 0.9879 | pathogenic | -0.158 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/Q | 0.1332 | likely_benign | 0.128 | benign | -1.111 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.49930589 | None | None | N |
K/R | 0.0815 | likely_benign | 0.0782 | benign | -0.827 | Destabilizing | 0.999 | D | 0.543 | neutral | N | 0.490878408 | None | None | N |
K/S | 0.5675 | likely_pathogenic | 0.5592 | ambiguous | -1.644 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
K/T | 0.2523 | likely_benign | 0.2621 | benign | -1.284 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | N | 0.445836765 | None | None | N |
K/V | 0.3267 | likely_benign | 0.3361 | benign | -0.158 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/W | 0.7065 | likely_pathogenic | 0.6803 | pathogenic | -0.586 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/Y | 0.5908 | likely_pathogenic | 0.5683 | pathogenic | -0.193 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.