Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22586 | 67981;67982;67983 | chr2:178579274;178579273;178579272 | chr2:179444001;179444000;179443999 |
N2AB | 20945 | 63058;63059;63060 | chr2:178579274;178579273;178579272 | chr2:179444001;179444000;179443999 |
N2A | 20018 | 60277;60278;60279 | chr2:178579274;178579273;178579272 | chr2:179444001;179444000;179443999 |
N2B | 13521 | 40786;40787;40788 | chr2:178579274;178579273;178579272 | chr2:179444001;179444000;179443999 |
Novex-1 | 13646 | 41161;41162;41163 | chr2:178579274;178579273;178579272 | chr2:179444001;179444000;179443999 |
Novex-2 | 13713 | 41362;41363;41364 | chr2:178579274;178579273;178579272 | chr2:179444001;179444000;179443999 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.946 | N | 0.705 | 0.387 | 0.413503789086 | gnomAD-4.0.0 | 3.18452E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88402E-05 | 0 | 2.86002E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8061 | likely_pathogenic | 0.8291 | pathogenic | -0.822 | Destabilizing | 0.87 | D | 0.543 | neutral | None | None | None | None | N |
K/C | 0.8419 | likely_pathogenic | 0.8594 | pathogenic | -0.807 | Destabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
K/D | 0.9307 | likely_pathogenic | 0.9443 | pathogenic | 0.214 | Stabilizing | 0.959 | D | 0.744 | deleterious | None | None | None | None | N |
K/E | 0.6096 | likely_pathogenic | 0.6553 | pathogenic | 0.305 | Stabilizing | 0.716 | D | 0.48 | neutral | N | 0.518752108 | None | None | N |
K/F | 0.8565 | likely_pathogenic | 0.8757 | pathogenic | -0.808 | Destabilizing | 0.994 | D | 0.807 | deleterious | None | None | None | None | N |
K/G | 0.9029 | likely_pathogenic | 0.9183 | pathogenic | -1.133 | Destabilizing | 0.959 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/H | 0.4427 | ambiguous | 0.4835 | ambiguous | -1.555 | Destabilizing | 0.994 | D | 0.782 | deleterious | None | None | None | None | N |
K/I | 0.5575 | ambiguous | 0.6001 | pathogenic | -0.031 | Destabilizing | 0.973 | D | 0.814 | deleterious | N | 0.499380406 | None | None | N |
K/L | 0.56 | ambiguous | 0.5998 | pathogenic | -0.031 | Destabilizing | 0.959 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/M | 0.4118 | ambiguous | 0.4517 | ambiguous | -0.023 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
K/N | 0.8044 | likely_pathogenic | 0.8403 | pathogenic | -0.273 | Destabilizing | 0.946 | D | 0.671 | neutral | N | 0.507142313 | None | None | N |
K/P | 0.9858 | likely_pathogenic | 0.9868 | pathogenic | -0.266 | Destabilizing | 0.979 | D | 0.757 | deleterious | None | None | None | None | N |
K/Q | 0.2971 | likely_benign | 0.3271 | benign | -0.432 | Destabilizing | 0.946 | D | 0.656 | neutral | N | 0.491493594 | None | None | N |
K/R | 0.088 | likely_benign | 0.0906 | benign | -0.442 | Destabilizing | 0.035 | N | 0.364 | neutral | N | 0.489286471 | None | None | N |
K/S | 0.8554 | likely_pathogenic | 0.8869 | pathogenic | -1.084 | Destabilizing | 0.87 | D | 0.569 | neutral | None | None | None | None | N |
K/T | 0.6678 | likely_pathogenic | 0.7019 | pathogenic | -0.79 | Destabilizing | 0.946 | D | 0.705 | prob.neutral | N | 0.506888824 | None | None | N |
K/V | 0.5822 | likely_pathogenic | 0.6191 | pathogenic | -0.266 | Destabilizing | 0.959 | D | 0.753 | deleterious | None | None | None | None | N |
K/W | 0.8195 | likely_pathogenic | 0.8426 | pathogenic | -0.608 | Destabilizing | 0.998 | D | 0.798 | deleterious | None | None | None | None | N |
K/Y | 0.6719 | likely_pathogenic | 0.7051 | pathogenic | -0.287 | Destabilizing | 0.979 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.