Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22591 | 67996;67997;67998 | chr2:178579259;178579258;178579257 | chr2:179443986;179443985;179443984 |
N2AB | 20950 | 63073;63074;63075 | chr2:178579259;178579258;178579257 | chr2:179443986;179443985;179443984 |
N2A | 20023 | 60292;60293;60294 | chr2:178579259;178579258;178579257 | chr2:179443986;179443985;179443984 |
N2B | 13526 | 40801;40802;40803 | chr2:178579259;178579258;178579257 | chr2:179443986;179443985;179443984 |
Novex-1 | 13651 | 41176;41177;41178 | chr2:178579259;178579258;178579257 | chr2:179443986;179443985;179443984 |
Novex-2 | 13718 | 41377;41378;41379 | chr2:178579259;178579258;178579257 | chr2:179443986;179443985;179443984 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.026 | N | 0.383 | 0.171 | 0.26169431596 | gnomAD-4.0.0 | 6.84365E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65689E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4525 | ambiguous | 0.4558 | ambiguous | -2.282 | Highly Destabilizing | 0.034 | N | 0.347 | neutral | None | None | None | None | N |
L/C | 0.7294 | likely_pathogenic | 0.7377 | pathogenic | -1.551 | Destabilizing | 0.997 | D | 0.572 | neutral | None | None | None | None | N |
L/D | 0.9425 | likely_pathogenic | 0.9483 | pathogenic | -2.39 | Highly Destabilizing | 0.976 | D | 0.703 | prob.neutral | None | None | None | None | N |
L/E | 0.7834 | likely_pathogenic | 0.8008 | pathogenic | -2.205 | Highly Destabilizing | 0.976 | D | 0.683 | prob.neutral | None | None | None | None | N |
L/F | 0.2912 | likely_benign | 0.2523 | benign | -1.388 | Destabilizing | 0.988 | D | 0.459 | neutral | None | None | None | None | N |
L/G | 0.8447 | likely_pathogenic | 0.8518 | pathogenic | -2.782 | Highly Destabilizing | 0.952 | D | 0.645 | neutral | None | None | None | None | N |
L/H | 0.7034 | likely_pathogenic | 0.7001 | pathogenic | -2.165 | Highly Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/I | 0.1024 | likely_benign | 0.1 | benign | -0.869 | Destabilizing | 0.811 | D | 0.47 | neutral | N | 0.514052496 | None | None | N |
L/K | 0.7476 | likely_pathogenic | 0.7519 | pathogenic | -1.854 | Destabilizing | 0.976 | D | 0.601 | neutral | None | None | None | None | N |
L/M | 0.1933 | likely_benign | 0.184 | benign | -0.751 | Destabilizing | 0.988 | D | 0.509 | neutral | None | None | None | None | N |
L/N | 0.831 | likely_pathogenic | 0.836 | pathogenic | -2.05 | Highly Destabilizing | 0.976 | D | 0.712 | prob.delet. | None | None | None | None | N |
L/P | 0.5839 | likely_pathogenic | 0.5933 | pathogenic | -1.317 | Destabilizing | 0.984 | D | 0.707 | prob.neutral | D | 0.544664627 | None | None | N |
L/Q | 0.5983 | likely_pathogenic | 0.5981 | pathogenic | -1.969 | Destabilizing | 0.984 | D | 0.667 | neutral | D | 0.526813862 | None | None | N |
L/R | 0.6785 | likely_pathogenic | 0.6788 | pathogenic | -1.529 | Destabilizing | 0.984 | D | 0.647 | neutral | D | 0.533308322 | None | None | N |
L/S | 0.6983 | likely_pathogenic | 0.7126 | pathogenic | -2.707 | Highly Destabilizing | 0.851 | D | 0.551 | neutral | None | None | None | None | N |
L/T | 0.4881 | ambiguous | 0.4861 | ambiguous | -2.375 | Highly Destabilizing | 0.261 | N | 0.359 | neutral | None | None | None | None | N |
L/V | 0.0972 | likely_benign | 0.0987 | benign | -1.317 | Destabilizing | 0.026 | N | 0.383 | neutral | N | 0.519479745 | None | None | N |
L/W | 0.6504 | likely_pathogenic | 0.6205 | pathogenic | -1.7 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
L/Y | 0.7105 | likely_pathogenic | 0.674 | pathogenic | -1.405 | Destabilizing | 0.996 | D | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.