Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22595 | 68008;68009;68010 | chr2:178579247;178579246;178579245 | chr2:179443974;179443973;179443972 |
N2AB | 20954 | 63085;63086;63087 | chr2:178579247;178579246;178579245 | chr2:179443974;179443973;179443972 |
N2A | 20027 | 60304;60305;60306 | chr2:178579247;178579246;178579245 | chr2:179443974;179443973;179443972 |
N2B | 13530 | 40813;40814;40815 | chr2:178579247;178579246;178579245 | chr2:179443974;179443973;179443972 |
Novex-1 | 13655 | 41188;41189;41190 | chr2:178579247;178579246;178579245 | chr2:179443974;179443973;179443972 |
Novex-2 | 13722 | 41389;41390;41391 | chr2:178579247;178579246;178579245 | chr2:179443974;179443973;179443972 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1438797997 | -0.028 | 0.003 | N | 0.297 | 0.091 | 0.104622674875 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs1438797997 | -0.028 | 0.003 | N | 0.297 | 0.091 | 0.104622674875 | gnomAD-4.0.0 | 4.33886E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08668E-06 | 0 | 1.60154E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0711 | likely_benign | 0.0808 | benign | -0.178 | Destabilizing | 0.003 | N | 0.297 | neutral | N | 0.426712286 | None | None | N |
T/C | 0.3947 | ambiguous | 0.4284 | ambiguous | -0.369 | Destabilizing | 0.973 | D | 0.477 | neutral | None | None | None | None | N |
T/D | 0.2721 | likely_benign | 0.3029 | benign | 0.138 | Stabilizing | 0.826 | D | 0.403 | neutral | None | None | None | None | N |
T/E | 0.2342 | likely_benign | 0.2591 | benign | 0.051 | Stabilizing | 0.404 | N | 0.387 | neutral | None | None | None | None | N |
T/F | 0.2811 | likely_benign | 0.3354 | benign | -0.851 | Destabilizing | 0.906 | D | 0.513 | neutral | None | None | None | None | N |
T/G | 0.1445 | likely_benign | 0.1609 | benign | -0.24 | Destabilizing | 0.404 | N | 0.438 | neutral | None | None | None | None | N |
T/H | 0.2187 | likely_benign | 0.244 | benign | -0.398 | Destabilizing | 0.973 | D | 0.506 | neutral | None | None | None | None | N |
T/I | 0.2065 | likely_benign | 0.2517 | benign | -0.14 | Destabilizing | 0.782 | D | 0.419 | neutral | N | 0.500017966 | None | None | N |
T/K | 0.1584 | likely_benign | 0.1707 | benign | -0.231 | Destabilizing | 0.404 | N | 0.391 | neutral | None | None | None | None | N |
T/L | 0.1164 | likely_benign | 0.1361 | benign | -0.14 | Destabilizing | 0.404 | N | 0.389 | neutral | None | None | None | None | N |
T/M | 0.1024 | likely_benign | 0.1137 | benign | -0.178 | Destabilizing | 0.991 | D | 0.421 | neutral | None | None | None | None | N |
T/N | 0.1028 | likely_benign | 0.1165 | benign | -0.079 | Destabilizing | 0.782 | D | 0.386 | neutral | N | 0.44448997 | None | None | N |
T/P | 0.1041 | likely_benign | 0.1188 | benign | -0.128 | Destabilizing | 0.879 | D | 0.415 | neutral | N | 0.430232594 | None | None | N |
T/Q | 0.1799 | likely_benign | 0.1914 | benign | -0.258 | Destabilizing | 0.826 | D | 0.413 | neutral | None | None | None | None | N |
T/R | 0.1571 | likely_benign | 0.1675 | benign | 0.036 | Stabilizing | 0.004 | N | 0.326 | neutral | None | None | None | None | N |
T/S | 0.0835 | likely_benign | 0.0933 | benign | -0.252 | Destabilizing | 0.338 | N | 0.43 | neutral | N | 0.423613266 | None | None | N |
T/V | 0.1478 | likely_benign | 0.1816 | benign | -0.128 | Destabilizing | 0.404 | N | 0.385 | neutral | None | None | None | None | N |
T/W | 0.6151 | likely_pathogenic | 0.6382 | pathogenic | -0.942 | Destabilizing | 0.991 | D | 0.604 | neutral | None | None | None | None | N |
T/Y | 0.2946 | likely_benign | 0.3256 | benign | -0.611 | Destabilizing | 0.906 | D | 0.509 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.