Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2260 | 7003;7004;7005 | chr2:178774933;178774932;178774931 | chr2:179639660;179639659;179639658 |
N2AB | 2260 | 7003;7004;7005 | chr2:178774933;178774932;178774931 | chr2:179639660;179639659;179639658 |
N2A | 2260 | 7003;7004;7005 | chr2:178774933;178774932;178774931 | chr2:179639660;179639659;179639658 |
N2B | 2214 | 6865;6866;6867 | chr2:178774933;178774932;178774931 | chr2:179639660;179639659;179639658 |
Novex-1 | 2214 | 6865;6866;6867 | chr2:178774933;178774932;178774931 | chr2:179639660;179639659;179639658 |
Novex-2 | 2214 | 6865;6866;6867 | chr2:178774933;178774932;178774931 | chr2:179639660;179639659;179639658 |
Novex-3 | 2260 | 7003;7004;7005 | chr2:178774933;178774932;178774931 | chr2:179639660;179639659;179639658 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs370058135 | -0.877 | 0.999 | D | 0.573 | 0.624 | None | gnomAD-2.1.1 | 2E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.42E-05 | 0 |
L/I | rs370058135 | -0.877 | 0.999 | D | 0.573 | 0.624 | None | gnomAD-4.0.0 | 4.78987E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29589E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9567 | likely_pathogenic | 0.9522 | pathogenic | -2.804 | Highly Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
L/C | 0.9176 | likely_pathogenic | 0.9134 | pathogenic | -1.825 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -3.502 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/E | 0.9981 | likely_pathogenic | 0.998 | pathogenic | -3.19 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
L/F | 0.8083 | likely_pathogenic | 0.8025 | pathogenic | -1.751 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.683276039 | None | None | N |
L/G | 0.9909 | likely_pathogenic | 0.9903 | pathogenic | -3.406 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/H | 0.9939 | likely_pathogenic | 0.9935 | pathogenic | -3.055 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.755415398 | None | None | N |
L/I | 0.2837 | likely_benign | 0.2745 | benign | -1.001 | Destabilizing | 0.999 | D | 0.573 | neutral | D | 0.653860452 | None | None | N |
L/K | 0.996 | likely_pathogenic | 0.9957 | pathogenic | -2.258 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/M | 0.403 | ambiguous | 0.3932 | ambiguous | -0.945 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/N | 0.9967 | likely_pathogenic | 0.9965 | pathogenic | -2.927 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/P | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -1.592 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.755415398 | None | None | N |
L/Q | 0.9923 | likely_pathogenic | 0.9918 | pathogenic | -2.612 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
L/R | 0.9913 | likely_pathogenic | 0.9908 | pathogenic | -2.199 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.755415398 | None | None | N |
L/S | 0.9965 | likely_pathogenic | 0.9961 | pathogenic | -3.502 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
L/T | 0.98 | likely_pathogenic | 0.9773 | pathogenic | -3.031 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/V | 0.3005 | likely_benign | 0.2913 | benign | -1.592 | Destabilizing | 0.999 | D | 0.572 | neutral | D | 0.628983435 | None | None | N |
L/W | 0.9855 | likely_pathogenic | 0.9854 | pathogenic | -2.22 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/Y | 0.9802 | likely_pathogenic | 0.9791 | pathogenic | -1.947 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.