Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22600 | 68023;68024;68025 | chr2:178579232;178579231;178579230 | chr2:179443959;179443958;179443957 |
N2AB | 20959 | 63100;63101;63102 | chr2:178579232;178579231;178579230 | chr2:179443959;179443958;179443957 |
N2A | 20032 | 60319;60320;60321 | chr2:178579232;178579231;178579230 | chr2:179443959;179443958;179443957 |
N2B | 13535 | 40828;40829;40830 | chr2:178579232;178579231;178579230 | chr2:179443959;179443958;179443957 |
Novex-1 | 13660 | 41203;41204;41205 | chr2:178579232;178579231;178579230 | chr2:179443959;179443958;179443957 |
Novex-2 | 13727 | 41404;41405;41406 | chr2:178579232;178579231;178579230 | chr2:179443959;179443958;179443957 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.928 | N | 0.581 | 0.343 | 0.39843156188 | gnomAD-4.0.0 | 6.84331E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99603E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2821 | likely_benign | 0.2517 | benign | -0.723 | Destabilizing | 0.928 | D | 0.649 | neutral | N | 0.510027969 | None | None | N |
E/C | 0.9209 | likely_pathogenic | 0.9138 | pathogenic | 0.052 | Stabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/D | 0.1856 | likely_benign | 0.1717 | benign | -0.382 | Destabilizing | 0.039 | N | 0.289 | neutral | N | 0.510027969 | None | None | N |
E/F | 0.8273 | likely_pathogenic | 0.8073 | pathogenic | -0.7 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
E/G | 0.4004 | ambiguous | 0.3555 | ambiguous | -0.916 | Destabilizing | 0.978 | D | 0.653 | neutral | N | 0.507559701 | None | None | N |
E/H | 0.5819 | likely_pathogenic | 0.557 | ambiguous | -0.727 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/I | 0.4621 | ambiguous | 0.4296 | ambiguous | -0.24 | Destabilizing | 0.992 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/K | 0.3197 | likely_benign | 0.2852 | benign | 0.355 | Stabilizing | 0.928 | D | 0.581 | neutral | N | 0.480262422 | None | None | N |
E/L | 0.5705 | likely_pathogenic | 0.5343 | ambiguous | -0.24 | Destabilizing | 0.992 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/M | 0.6117 | likely_pathogenic | 0.5835 | pathogenic | 0.147 | Stabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/N | 0.4237 | ambiguous | 0.3833 | ambiguous | 0.005 | Stabilizing | 0.968 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/P | 0.9751 | likely_pathogenic | 0.9636 | pathogenic | -0.383 | Destabilizing | 0.992 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/Q | 0.2035 | likely_benign | 0.1896 | benign | 0.028 | Stabilizing | 0.978 | D | 0.622 | neutral | N | 0.517204657 | None | None | N |
E/R | 0.4857 | ambiguous | 0.4484 | ambiguous | 0.354 | Stabilizing | 0.992 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/S | 0.3221 | likely_benign | 0.2926 | benign | -0.143 | Destabilizing | 0.944 | D | 0.617 | neutral | None | None | None | None | N |
E/T | 0.3168 | likely_benign | 0.2846 | benign | 0.03 | Stabilizing | 0.983 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/V | 0.296 | likely_benign | 0.268 | benign | -0.383 | Destabilizing | 0.989 | D | 0.719 | prob.delet. | N | 0.52078368 | None | None | N |
E/W | 0.953 | likely_pathogenic | 0.9479 | pathogenic | -0.514 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/Y | 0.7484 | likely_pathogenic | 0.7188 | pathogenic | -0.444 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.