Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22601 | 68026;68027;68028 | chr2:178579229;178579228;178579227 | chr2:179443956;179443955;179443954 |
N2AB | 20960 | 63103;63104;63105 | chr2:178579229;178579228;178579227 | chr2:179443956;179443955;179443954 |
N2A | 20033 | 60322;60323;60324 | chr2:178579229;178579228;178579227 | chr2:179443956;179443955;179443954 |
N2B | 13536 | 40831;40832;40833 | chr2:178579229;178579228;178579227 | chr2:179443956;179443955;179443954 |
Novex-1 | 13661 | 41206;41207;41208 | chr2:178579229;178579228;178579227 | chr2:179443956;179443955;179443954 |
Novex-2 | 13728 | 41407;41408;41409 | chr2:178579229;178579228;178579227 | chr2:179443956;179443955;179443954 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs1035871236 | None | None | N | 0.316 | 0.078 | 0.229264304666 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/T | rs1035871236 | None | None | N | 0.316 | 0.078 | 0.229264304666 | gnomAD-4.0.0 | 6.5773E-06 | None | None | None | None | N | None | 2.41418E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1008 | likely_benign | 0.0935 | benign | -0.503 | Destabilizing | None | N | 0.336 | neutral | N | 0.464004891 | None | None | N |
S/C | 0.1398 | likely_benign | 0.1471 | benign | -0.28 | Destabilizing | 0.824 | D | 0.501 | neutral | None | None | None | None | N |
S/D | 0.5067 | ambiguous | 0.4585 | ambiguous | -0.053 | Destabilizing | 0.149 | N | 0.456 | neutral | None | None | None | None | N |
S/E | 0.5959 | likely_pathogenic | 0.5513 | ambiguous | -0.15 | Destabilizing | 0.149 | N | 0.422 | neutral | None | None | None | None | N |
S/F | 0.3245 | likely_benign | 0.2719 | benign | -1.161 | Destabilizing | 0.555 | D | 0.569 | neutral | None | None | None | None | N |
S/G | 0.1338 | likely_benign | 0.1241 | benign | -0.601 | Destabilizing | 0.035 | N | 0.433 | neutral | None | None | None | None | N |
S/H | 0.437 | ambiguous | 0.4269 | ambiguous | -1.224 | Destabilizing | 0.935 | D | 0.499 | neutral | None | None | None | None | N |
S/I | 0.2289 | likely_benign | 0.2036 | benign | -0.371 | Destabilizing | 0.235 | N | 0.546 | neutral | None | None | None | None | N |
S/K | 0.7465 | likely_pathogenic | 0.7129 | pathogenic | -0.479 | Destabilizing | 0.149 | N | 0.424 | neutral | None | None | None | None | N |
S/L | 0.1577 | likely_benign | 0.1392 | benign | -0.371 | Destabilizing | 0.062 | N | 0.535 | neutral | N | 0.518378093 | None | None | N |
S/M | 0.241 | likely_benign | 0.2218 | benign | 0.062 | Stabilizing | 0.555 | D | 0.501 | neutral | None | None | None | None | N |
S/N | 0.1646 | likely_benign | 0.1497 | benign | -0.219 | Destabilizing | 0.149 | N | 0.483 | neutral | None | None | None | None | N |
S/P | 0.6061 | likely_pathogenic | 0.4802 | ambiguous | -0.388 | Destabilizing | 0.484 | N | 0.482 | neutral | N | 0.503179354 | None | None | N |
S/Q | 0.5765 | likely_pathogenic | 0.5606 | ambiguous | -0.533 | Destabilizing | 0.555 | D | 0.496 | neutral | None | None | None | None | N |
S/R | 0.7261 | likely_pathogenic | 0.6945 | pathogenic | -0.279 | Destabilizing | 0.38 | N | 0.486 | neutral | None | None | None | None | N |
S/T | 0.0765 | likely_benign | 0.0703 | benign | -0.322 | Destabilizing | None | N | 0.316 | neutral | N | 0.450595663 | None | None | N |
S/V | 0.2039 | likely_benign | 0.1914 | benign | -0.388 | Destabilizing | 0.081 | N | 0.537 | neutral | None | None | None | None | N |
S/W | 0.5226 | ambiguous | 0.4851 | ambiguous | -1.136 | Destabilizing | 0.935 | D | 0.636 | neutral | None | None | None | None | N |
S/Y | 0.236 | likely_benign | 0.2137 | benign | -0.863 | Destabilizing | 0.555 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.