Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22602 | 68029;68030;68031 | chr2:178579226;178579225;178579224 | chr2:179443953;179443952;179443951 |
N2AB | 20961 | 63106;63107;63108 | chr2:178579226;178579225;178579224 | chr2:179443953;179443952;179443951 |
N2A | 20034 | 60325;60326;60327 | chr2:178579226;178579225;178579224 | chr2:179443953;179443952;179443951 |
N2B | 13537 | 40834;40835;40836 | chr2:178579226;178579225;178579224 | chr2:179443953;179443952;179443951 |
Novex-1 | 13662 | 41209;41210;41211 | chr2:178579226;178579225;178579224 | chr2:179443953;179443952;179443951 |
Novex-2 | 13729 | 41410;41411;41412 | chr2:178579226;178579225;178579224 | chr2:179443953;179443952;179443951 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.883 | N | 0.413 | 0.415 | 0.524480850804 | gnomAD-4.0.0 | 8.40227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.25325E-04 | 0 |
S/F | None | None | 0.667 | N | 0.467 | 0.436 | 0.674675629537 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
S/P | rs780276317 | None | 0.667 | N | 0.336 | 0.21 | 0.258283824007 | gnomAD-4.0.0 | 1.59188E-06 | None | None | None | None | N | None | 5.66316E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1714 | likely_benign | 0.1474 | benign | -0.403 | Destabilizing | 0.055 | N | 0.391 | neutral | N | 0.514145709 | None | None | N |
S/C | 0.2142 | likely_benign | 0.2117 | benign | -0.265 | Destabilizing | 0.883 | D | 0.413 | neutral | N | 0.49400135 | None | None | N |
S/D | 0.4574 | ambiguous | 0.4021 | ambiguous | 0.161 | Stabilizing | 0.272 | N | 0.347 | neutral | None | None | None | None | N |
S/E | 0.7783 | likely_pathogenic | 0.709 | pathogenic | 0.062 | Stabilizing | 0.272 | N | 0.345 | neutral | None | None | None | None | N |
S/F | 0.5015 | ambiguous | 0.4191 | ambiguous | -1.053 | Destabilizing | 0.667 | D | 0.467 | neutral | N | 0.49374786 | None | None | N |
S/G | 0.123 | likely_benign | 0.1115 | benign | -0.497 | Destabilizing | 0.272 | N | 0.37 | neutral | None | None | None | None | N |
S/H | 0.5556 | ambiguous | 0.5508 | ambiguous | -1.003 | Destabilizing | 0.968 | D | 0.408 | neutral | None | None | None | None | N |
S/I | 0.5218 | ambiguous | 0.4299 | ambiguous | -0.288 | Destabilizing | 0.396 | N | 0.418 | neutral | None | None | None | None | N |
S/K | 0.8559 | likely_pathogenic | 0.8245 | pathogenic | -0.406 | Destabilizing | 0.272 | N | 0.344 | neutral | None | None | None | None | N |
S/L | 0.1745 | likely_benign | 0.1462 | benign | -0.288 | Destabilizing | 0.157 | N | 0.4 | neutral | None | None | None | None | N |
S/M | 0.2828 | likely_benign | 0.2708 | benign | 0.019 | Stabilizing | 0.909 | D | 0.403 | neutral | None | None | None | None | N |
S/N | 0.1754 | likely_benign | 0.162 | benign | -0.16 | Destabilizing | 0.272 | N | 0.387 | neutral | None | None | None | None | N |
S/P | 0.7995 | likely_pathogenic | 0.748 | pathogenic | -0.299 | Destabilizing | 0.667 | D | 0.336 | neutral | N | 0.488467941 | None | None | N |
S/Q | 0.751 | likely_pathogenic | 0.7333 | pathogenic | -0.428 | Destabilizing | 0.726 | D | 0.389 | neutral | None | None | None | None | N |
S/R | 0.8282 | likely_pathogenic | 0.7999 | pathogenic | -0.196 | Destabilizing | 0.567 | D | 0.336 | neutral | None | None | None | None | N |
S/T | 0.0642 | likely_benign | 0.0647 | benign | -0.282 | Destabilizing | None | N | 0.176 | neutral | N | 0.444419052 | None | None | N |
S/V | 0.4143 | ambiguous | 0.3567 | ambiguous | -0.299 | Destabilizing | 0.157 | N | 0.399 | neutral | None | None | None | None | N |
S/W | 0.6406 | likely_pathogenic | 0.6036 | pathogenic | -1.05 | Destabilizing | 0.968 | D | 0.581 | neutral | None | None | None | None | N |
S/Y | 0.4373 | ambiguous | 0.39 | ambiguous | -0.767 | Destabilizing | 0.667 | D | 0.478 | neutral | D | 0.529904596 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.