Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22615 | 68068;68069;68070 | chr2:178579187;178579186;178579185 | chr2:179443914;179443913;179443912 |
N2AB | 20974 | 63145;63146;63147 | chr2:178579187;178579186;178579185 | chr2:179443914;179443913;179443912 |
N2A | 20047 | 60364;60365;60366 | chr2:178579187;178579186;178579185 | chr2:179443914;179443913;179443912 |
N2B | 13550 | 40873;40874;40875 | chr2:178579187;178579186;178579185 | chr2:179443914;179443913;179443912 |
Novex-1 | 13675 | 41248;41249;41250 | chr2:178579187;178579186;178579185 | chr2:179443914;179443913;179443912 |
Novex-2 | 13742 | 41449;41450;41451 | chr2:178579187;178579186;178579185 | chr2:179443914;179443913;179443912 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs372296363 | 0.715 | 0.998 | N | 0.601 | 0.478 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
K/I | rs372296363 | 0.715 | 0.998 | N | 0.601 | 0.478 | None | gnomAD-4.0.0 | 9.55098E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.42976E-05 | 0 | 3.0259E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7464 | likely_pathogenic | 0.701 | pathogenic | -0.076 | Destabilizing | 0.97 | D | 0.435 | neutral | None | None | None | None | N |
K/C | 0.9198 | likely_pathogenic | 0.8988 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
K/D | 0.9252 | likely_pathogenic | 0.9079 | pathogenic | 0.003 | Stabilizing | 0.996 | D | 0.409 | neutral | None | None | None | None | N |
K/E | 0.6307 | likely_pathogenic | 0.5759 | pathogenic | 0.02 | Stabilizing | 0.961 | D | 0.421 | neutral | N | 0.473466083 | None | None | N |
K/F | 0.9543 | likely_pathogenic | 0.9384 | pathogenic | -0.178 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
K/G | 0.8425 | likely_pathogenic | 0.8117 | pathogenic | -0.311 | Destabilizing | 0.985 | D | 0.44 | neutral | None | None | None | None | N |
K/H | 0.5744 | likely_pathogenic | 0.5405 | ambiguous | -0.619 | Destabilizing | 0.999 | D | 0.458 | neutral | None | None | None | None | N |
K/I | 0.696 | likely_pathogenic | 0.6389 | pathogenic | 0.471 | Stabilizing | 0.998 | D | 0.601 | neutral | N | 0.514120627 | None | None | N |
K/L | 0.6591 | likely_pathogenic | 0.6128 | pathogenic | 0.471 | Stabilizing | 0.97 | D | 0.44 | neutral | None | None | None | None | N |
K/M | 0.5956 | likely_pathogenic | 0.5534 | ambiguous | 0.296 | Stabilizing | 1.0 | D | 0.458 | neutral | None | None | None | None | N |
K/N | 0.8293 | likely_pathogenic | 0.7976 | pathogenic | 0.125 | Stabilizing | 0.994 | D | 0.38 | neutral | N | 0.455376172 | None | None | N |
K/P | 0.774 | likely_pathogenic | 0.7411 | pathogenic | 0.318 | Stabilizing | 0.999 | D | 0.447 | neutral | None | None | None | None | N |
K/Q | 0.3501 | ambiguous | 0.3233 | benign | -0.065 | Destabilizing | 0.989 | D | 0.397 | neutral | N | 0.48483787 | None | None | N |
K/R | 0.0847 | likely_benign | 0.0835 | benign | -0.16 | Destabilizing | 0.031 | N | 0.245 | neutral | N | 0.381017282 | None | None | N |
K/S | 0.8526 | likely_pathogenic | 0.8227 | pathogenic | -0.388 | Destabilizing | 0.985 | D | 0.405 | neutral | None | None | None | None | N |
K/T | 0.6118 | likely_pathogenic | 0.5688 | pathogenic | -0.215 | Destabilizing | 0.98 | D | 0.423 | neutral | N | 0.498228455 | None | None | N |
K/V | 0.6786 | likely_pathogenic | 0.6303 | pathogenic | 0.318 | Stabilizing | 0.996 | D | 0.488 | neutral | None | None | None | None | N |
K/W | 0.9337 | likely_pathogenic | 0.9204 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
K/Y | 0.8732 | likely_pathogenic | 0.8423 | pathogenic | 0.183 | Stabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.