Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2262 | 7009;7010;7011 | chr2:178774927;178774926;178774925 | chr2:179639654;179639653;179639652 |
N2AB | 2262 | 7009;7010;7011 | chr2:178774927;178774926;178774925 | chr2:179639654;179639653;179639652 |
N2A | 2262 | 7009;7010;7011 | chr2:178774927;178774926;178774925 | chr2:179639654;179639653;179639652 |
N2B | 2216 | 6871;6872;6873 | chr2:178774927;178774926;178774925 | chr2:179639654;179639653;179639652 |
Novex-1 | 2216 | 6871;6872;6873 | chr2:178774927;178774926;178774925 | chr2:179639654;179639653;179639652 |
Novex-2 | 2216 | 6871;6872;6873 | chr2:178774927;178774926;178774925 | chr2:179639654;179639653;179639652 |
Novex-3 | 2262 | 7009;7010;7011 | chr2:178774927;178774926;178774925 | chr2:179639654;179639653;179639652 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1430183288 | -0.085 | 0.997 | D | 0.723 | 0.526 | 0.700794567812 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.85E-06 | 0 |
V/I | rs1430183288 | -0.085 | 0.997 | D | 0.723 | 0.526 | 0.700794567812 | gnomAD-4.0.0 | 1.59173E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85783E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6015 | likely_pathogenic | 0.5701 | pathogenic | -1.666 | Destabilizing | 0.999 | D | 0.758 | deleterious | D | 0.757021101 | None | None | N |
V/C | 0.9506 | likely_pathogenic | 0.9404 | pathogenic | -1.132 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
V/D | 0.9833 | likely_pathogenic | 0.9828 | pathogenic | -1.606 | Destabilizing | 1.0 | D | 0.806 | deleterious | D | 0.756300027 | None | None | N |
V/E | 0.9503 | likely_pathogenic | 0.948 | pathogenic | -1.581 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/F | 0.811 | likely_pathogenic | 0.7801 | pathogenic | -1.202 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.757021101 | None | None | N |
V/G | 0.8259 | likely_pathogenic | 0.8127 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | D | 0.756300027 | None | None | N |
V/H | 0.9857 | likely_pathogenic | 0.9829 | pathogenic | -1.569 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
V/I | 0.1219 | likely_benign | 0.1082 | benign | -0.806 | Destabilizing | 0.997 | D | 0.723 | prob.delet. | D | 0.592638176 | None | None | N |
V/K | 0.9348 | likely_pathogenic | 0.9332 | pathogenic | -1.387 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/L | 0.6413 | likely_pathogenic | 0.5812 | pathogenic | -0.806 | Destabilizing | 0.997 | D | 0.759 | deleterious | D | 0.722562219 | None | None | N |
V/M | 0.6053 | likely_pathogenic | 0.5419 | ambiguous | -0.679 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/N | 0.9451 | likely_pathogenic | 0.9417 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/P | 0.9386 | likely_pathogenic | 0.9344 | pathogenic | -1.06 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
V/Q | 0.948 | likely_pathogenic | 0.9419 | pathogenic | -1.356 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
V/R | 0.9083 | likely_pathogenic | 0.9073 | pathogenic | -0.907 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/S | 0.8179 | likely_pathogenic | 0.8052 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
V/T | 0.5251 | ambiguous | 0.5135 | ambiguous | -1.608 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
V/W | 0.9946 | likely_pathogenic | 0.9923 | pathogenic | -1.419 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
V/Y | 0.9765 | likely_pathogenic | 0.9725 | pathogenic | -1.135 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.