Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22621 | 68086;68087;68088 | chr2:178579169;178579168;178579167 | chr2:179443896;179443895;179443894 |
N2AB | 20980 | 63163;63164;63165 | chr2:178579169;178579168;178579167 | chr2:179443896;179443895;179443894 |
N2A | 20053 | 60382;60383;60384 | chr2:178579169;178579168;178579167 | chr2:179443896;179443895;179443894 |
N2B | 13556 | 40891;40892;40893 | chr2:178579169;178579168;178579167 | chr2:179443896;179443895;179443894 |
Novex-1 | 13681 | 41266;41267;41268 | chr2:178579169;178579168;178579167 | chr2:179443896;179443895;179443894 |
Novex-2 | 13748 | 41467;41468;41469 | chr2:178579169;178579168;178579167 | chr2:179443896;179443895;179443894 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.772 | 0.793 | 0.810653237695 | gnomAD-4.0.0 | 1.59198E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88267E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9973 | likely_pathogenic | 0.9971 | pathogenic | -1.826 | Destabilizing | 0.992 | D | 0.782 | deleterious | None | None | None | None | N |
Y/C | 0.9633 | likely_pathogenic | 0.9602 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.772 | deleterious | D | 0.620456015 | None | None | N |
Y/D | 0.9979 | likely_pathogenic | 0.9978 | pathogenic | -1.989 | Destabilizing | 0.999 | D | 0.822 | deleterious | D | 0.620456015 | None | None | N |
Y/E | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -1.741 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
Y/F | 0.3069 | likely_benign | 0.2878 | benign | -0.397 | Destabilizing | 0.121 | N | 0.378 | neutral | D | 0.580830372 | None | None | N |
Y/G | 0.9939 | likely_pathogenic | 0.9933 | pathogenic | -2.274 | Highly Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
Y/H | 0.9791 | likely_pathogenic | 0.9772 | pathogenic | -1.494 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | D | 0.620254211 | None | None | N |
Y/I | 0.9576 | likely_pathogenic | 0.9569 | pathogenic | -0.369 | Destabilizing | 0.995 | D | 0.769 | deleterious | None | None | None | None | N |
Y/K | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -1.235 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
Y/L | 0.9369 | likely_pathogenic | 0.9364 | pathogenic | -0.369 | Destabilizing | 0.967 | D | 0.719 | prob.delet. | None | None | None | None | N |
Y/M | 0.978 | likely_pathogenic | 0.9761 | pathogenic | -0.516 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
Y/N | 0.9865 | likely_pathogenic | 0.9846 | pathogenic | -2.048 | Highly Destabilizing | 0.999 | D | 0.804 | deleterious | D | 0.620456015 | None | None | N |
Y/P | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -0.866 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
Y/Q | 0.9988 | likely_pathogenic | 0.9986 | pathogenic | -1.617 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
Y/R | 0.997 | likely_pathogenic | 0.9967 | pathogenic | -1.538 | Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
Y/S | 0.9947 | likely_pathogenic | 0.9943 | pathogenic | -2.482 | Highly Destabilizing | 0.999 | D | 0.798 | deleterious | D | 0.620456015 | None | None | N |
Y/T | 0.9971 | likely_pathogenic | 0.9968 | pathogenic | -2.09 | Highly Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
Y/V | 0.9471 | likely_pathogenic | 0.9464 | pathogenic | -0.866 | Destabilizing | 0.983 | D | 0.77 | deleterious | None | None | None | None | N |
Y/W | 0.861 | likely_pathogenic | 0.8678 | pathogenic | 0.253 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.