Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22625 | 68098;68099;68100 | chr2:178579157;178579156;178579155 | chr2:179443884;179443883;179443882 |
N2AB | 20984 | 63175;63176;63177 | chr2:178579157;178579156;178579155 | chr2:179443884;179443883;179443882 |
N2A | 20057 | 60394;60395;60396 | chr2:178579157;178579156;178579155 | chr2:179443884;179443883;179443882 |
N2B | 13560 | 40903;40904;40905 | chr2:178579157;178579156;178579155 | chr2:179443884;179443883;179443882 |
Novex-1 | 13685 | 41278;41279;41280 | chr2:178579157;178579156;178579155 | chr2:179443884;179443883;179443882 |
Novex-2 | 13752 | 41479;41480;41481 | chr2:178579157;178579156;178579155 | chr2:179443884;179443883;179443882 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs753627819 | -1.2 | 0.543 | N | 0.339 | 0.174 | 0.527857482506 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
L/V | rs753627819 | -1.2 | 0.543 | N | 0.339 | 0.174 | 0.527857482506 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85989E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5352 | ambiguous | 0.4669 | ambiguous | -2.149 | Highly Destabilizing | 0.611 | D | 0.457 | neutral | None | None | None | None | I |
L/C | 0.7463 | likely_pathogenic | 0.7311 | pathogenic | -1.625 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
L/D | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -1.878 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | I |
L/E | 0.9956 | likely_pathogenic | 0.9938 | pathogenic | -1.807 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | I |
L/F | 0.8571 | likely_pathogenic | 0.843 | pathogenic | -1.499 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | N | 0.502671402 | None | None | I |
L/G | 0.9312 | likely_pathogenic | 0.9121 | pathogenic | -2.553 | Highly Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | I |
L/H | 0.9941 | likely_pathogenic | 0.9926 | pathogenic | -1.844 | Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.514699271 | None | None | I |
L/I | 0.2591 | likely_benign | 0.2317 | benign | -1.062 | Destabilizing | 0.978 | D | 0.603 | neutral | N | 0.482032252 | None | None | I |
L/K | 0.9959 | likely_pathogenic | 0.995 | pathogenic | -1.541 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | I |
L/M | 0.3648 | ambiguous | 0.3158 | benign | -0.966 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | I |
L/N | 0.9954 | likely_pathogenic | 0.9936 | pathogenic | -1.493 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
L/P | 0.9977 | likely_pathogenic | 0.997 | pathogenic | -1.397 | Destabilizing | 0.998 | D | 0.805 | deleterious | N | 0.514445782 | None | None | I |
L/Q | 0.9773 | likely_pathogenic | 0.9688 | pathogenic | -1.605 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
L/R | 0.9865 | likely_pathogenic | 0.9851 | pathogenic | -1.032 | Destabilizing | 0.998 | D | 0.775 | deleterious | N | 0.514445782 | None | None | I |
L/S | 0.9469 | likely_pathogenic | 0.9226 | pathogenic | -2.188 | Highly Destabilizing | 0.995 | D | 0.774 | deleterious | None | None | None | None | I |
L/T | 0.8498 | likely_pathogenic | 0.8028 | pathogenic | -1.989 | Destabilizing | 0.992 | D | 0.719 | prob.delet. | None | None | None | None | I |
L/V | 0.1543 | likely_benign | 0.1445 | benign | -1.397 | Destabilizing | 0.543 | D | 0.339 | neutral | N | 0.437255433 | None | None | I |
L/W | 0.9916 | likely_pathogenic | 0.99 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
L/Y | 0.9884 | likely_pathogenic | 0.9856 | pathogenic | -1.407 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.