Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22633 | 68122;68123;68124 | chr2:178579133;178579132;178579131 | chr2:179443860;179443859;179443858 |
N2AB | 20992 | 63199;63200;63201 | chr2:178579133;178579132;178579131 | chr2:179443860;179443859;179443858 |
N2A | 20065 | 60418;60419;60420 | chr2:178579133;178579132;178579131 | chr2:179443860;179443859;179443858 |
N2B | 13568 | 40927;40928;40929 | chr2:178579133;178579132;178579131 | chr2:179443860;179443859;179443858 |
Novex-1 | 13693 | 41302;41303;41304 | chr2:178579133;178579132;178579131 | chr2:179443860;179443859;179443858 |
Novex-2 | 13760 | 41503;41504;41505 | chr2:178579133;178579132;178579131 | chr2:179443860;179443859;179443858 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.994 | N | 0.581 | 0.441 | 0.564725595184 | gnomAD-4.0.0 | 1.59204E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.168 | likely_benign | 0.1552 | benign | -0.465 | Destabilizing | 0.994 | D | 0.615 | neutral | N | 0.521325185 | None | None | I |
E/C | 0.879 | likely_pathogenic | 0.8775 | pathogenic | 0.011 | Stabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
E/D | 0.2124 | likely_benign | 0.1858 | benign | -0.414 | Destabilizing | 0.104 | N | 0.245 | neutral | N | 0.492042428 | None | None | I |
E/F | 0.8679 | likely_pathogenic | 0.8482 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
E/G | 0.263 | likely_benign | 0.235 | benign | -0.67 | Destabilizing | 0.994 | D | 0.583 | neutral | N | 0.50642452 | None | None | I |
E/H | 0.6237 | likely_pathogenic | 0.5999 | pathogenic | -0.264 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
E/I | 0.4237 | ambiguous | 0.402 | ambiguous | 0.042 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
E/K | 0.2759 | likely_benign | 0.248 | benign | 0.317 | Stabilizing | 0.994 | D | 0.581 | neutral | N | 0.504123504 | None | None | I |
E/L | 0.5696 | likely_pathogenic | 0.5383 | ambiguous | 0.042 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
E/M | 0.5104 | ambiguous | 0.497 | ambiguous | 0.23 | Stabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
E/N | 0.3948 | ambiguous | 0.3614 | ambiguous | 0.001 | Stabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | I |
E/P | 0.9127 | likely_pathogenic | 0.887 | pathogenic | -0.107 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
E/Q | 0.1786 | likely_benign | 0.1723 | benign | 0.025 | Stabilizing | 0.998 | D | 0.637 | neutral | N | 0.520978468 | None | None | I |
E/R | 0.459 | ambiguous | 0.432 | ambiguous | 0.461 | Stabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | I |
E/S | 0.2202 | likely_benign | 0.2095 | benign | -0.16 | Destabilizing | 0.992 | D | 0.582 | neutral | None | None | None | None | I |
E/T | 0.1648 | likely_benign | 0.1618 | benign | 0.007 | Stabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
E/V | 0.2181 | likely_benign | 0.2027 | benign | -0.107 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | D | 0.530003383 | None | None | I |
E/W | 0.9529 | likely_pathogenic | 0.9473 | pathogenic | -0.225 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
E/Y | 0.796 | likely_pathogenic | 0.7673 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.