Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22635 | 68128;68129;68130 | chr2:178579127;178579126;178579125 | chr2:179443854;179443853;179443852 |
N2AB | 20994 | 63205;63206;63207 | chr2:178579127;178579126;178579125 | chr2:179443854;179443853;179443852 |
N2A | 20067 | 60424;60425;60426 | chr2:178579127;178579126;178579125 | chr2:179443854;179443853;179443852 |
N2B | 13570 | 40933;40934;40935 | chr2:178579127;178579126;178579125 | chr2:179443854;179443853;179443852 |
Novex-1 | 13695 | 41308;41309;41310 | chr2:178579127;178579126;178579125 | chr2:179443854;179443853;179443852 |
Novex-2 | 13762 | 41509;41510;41511 | chr2:178579127;178579126;178579125 | chr2:179443854;179443853;179443852 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.051 | N | 0.208 | 0.22 | 0.303123707472 | gnomAD-4.0.0 | 3.42178E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49805E-06 | 0 | 0 |
T/S | rs1465804178 | None | 0.051 | N | 0.177 | 0.09 | 0.154104182512 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/S | rs1465804178 | None | 0.051 | N | 0.177 | 0.09 | 0.154104182512 | gnomAD-4.0.0 | 6.57626E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47128E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0777 | likely_benign | 0.0757 | benign | -0.303 | Destabilizing | 0.022 | N | 0.165 | neutral | N | 0.508931891 | None | None | I |
T/C | 0.2841 | likely_benign | 0.2803 | benign | -0.268 | Destabilizing | 0.998 | D | 0.506 | neutral | None | None | None | None | I |
T/D | 0.2918 | likely_benign | 0.2708 | benign | 0.283 | Stabilizing | 0.728 | D | 0.467 | neutral | None | None | None | None | I |
T/E | 0.24 | likely_benign | 0.2208 | benign | 0.205 | Stabilizing | 0.842 | D | 0.441 | neutral | None | None | None | None | I |
T/F | 0.1684 | likely_benign | 0.1632 | benign | -0.816 | Destabilizing | 0.991 | D | 0.534 | neutral | None | None | None | None | I |
T/G | 0.2223 | likely_benign | 0.2098 | benign | -0.422 | Destabilizing | 0.525 | D | 0.513 | neutral | None | None | None | None | I |
T/H | 0.1889 | likely_benign | 0.1863 | benign | -0.691 | Destabilizing | 0.974 | D | 0.532 | neutral | None | None | None | None | I |
T/I | 0.1029 | likely_benign | 0.0985 | benign | -0.112 | Destabilizing | 0.966 | D | 0.494 | neutral | D | 0.531520749 | None | None | I |
T/K | 0.1821 | likely_benign | 0.1729 | benign | -0.297 | Destabilizing | 0.029 | N | 0.193 | neutral | None | None | None | None | I |
T/L | 0.0911 | likely_benign | 0.086 | benign | -0.112 | Destabilizing | 0.842 | D | 0.442 | neutral | None | None | None | None | I |
T/M | 0.0822 | likely_benign | 0.081 | benign | -0.015 | Destabilizing | 0.991 | D | 0.509 | neutral | None | None | None | None | I |
T/N | 0.0903 | likely_benign | 0.0883 | benign | -0.083 | Destabilizing | 0.051 | N | 0.208 | neutral | N | 0.517263372 | None | None | I |
T/P | 0.1781 | likely_benign | 0.1662 | benign | -0.147 | Destabilizing | 0.891 | D | 0.492 | neutral | D | 0.531867465 | None | None | I |
T/Q | 0.1725 | likely_benign | 0.1668 | benign | -0.298 | Destabilizing | 0.949 | D | 0.491 | neutral | None | None | None | None | I |
T/R | 0.1558 | likely_benign | 0.1505 | benign | -0.042 | Destabilizing | 0.728 | D | 0.45 | neutral | None | None | None | None | I |
T/S | 0.0913 | likely_benign | 0.0897 | benign | -0.301 | Destabilizing | 0.051 | N | 0.177 | neutral | N | 0.488959263 | None | None | I |
T/V | 0.0904 | likely_benign | 0.0895 | benign | -0.147 | Destabilizing | 0.842 | D | 0.304 | neutral | None | None | None | None | I |
T/W | 0.5115 | ambiguous | 0.4792 | ambiguous | -0.835 | Destabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | I |
T/Y | 0.2201 | likely_benign | 0.2085 | benign | -0.54 | Destabilizing | 0.991 | D | 0.533 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.