Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22636 | 68131;68132;68133 | chr2:178579124;178579123;178579122 | chr2:179443851;179443850;179443849 |
N2AB | 20995 | 63208;63209;63210 | chr2:178579124;178579123;178579122 | chr2:179443851;179443850;179443849 |
N2A | 20068 | 60427;60428;60429 | chr2:178579124;178579123;178579122 | chr2:179443851;179443850;179443849 |
N2B | 13571 | 40936;40937;40938 | chr2:178579124;178579123;178579122 | chr2:179443851;179443850;179443849 |
Novex-1 | 13696 | 41311;41312;41313 | chr2:178579124;178579123;178579122 | chr2:179443851;179443850;179443849 |
Novex-2 | 13763 | 41512;41513;41514 | chr2:178579124;178579123;178579122 | chr2:179443851;179443850;179443849 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs1239261963 | -0.187 | None | N | 0.141 | 0.132 | 0.242825505644 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
I/L | rs1239261963 | -0.187 | None | N | 0.141 | 0.132 | 0.242825505644 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/L | rs1239261963 | -0.187 | None | N | 0.141 | 0.132 | 0.242825505644 | gnomAD-4.0.0 | 6.57479E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47093E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8318 | likely_pathogenic | 0.7857 | pathogenic | -1.798 | Destabilizing | 0.067 | N | 0.511 | neutral | None | None | None | None | I |
I/C | 0.8284 | likely_pathogenic | 0.7918 | pathogenic | -1.46 | Destabilizing | 0.935 | D | 0.602 | neutral | None | None | None | None | I |
I/D | 0.9974 | likely_pathogenic | 0.9966 | pathogenic | -0.643 | Destabilizing | 0.791 | D | 0.643 | neutral | None | None | None | None | I |
I/E | 0.9937 | likely_pathogenic | 0.9921 | pathogenic | -0.512 | Destabilizing | 0.555 | D | 0.665 | neutral | None | None | None | None | I |
I/F | 0.2738 | likely_benign | 0.2309 | benign | -1.003 | Destabilizing | None | N | 0.192 | neutral | N | 0.475070033 | None | None | I |
I/G | 0.9798 | likely_pathogenic | 0.9713 | pathogenic | -2.224 | Highly Destabilizing | 0.262 | N | 0.667 | neutral | None | None | None | None | I |
I/H | 0.9783 | likely_pathogenic | 0.9723 | pathogenic | -1.234 | Destabilizing | 0.935 | D | 0.639 | neutral | None | None | None | None | I |
I/K | 0.9871 | likely_pathogenic | 0.9833 | pathogenic | -1.125 | Destabilizing | 0.555 | D | 0.661 | neutral | None | None | None | None | I |
I/L | 0.0941 | likely_benign | 0.0922 | benign | -0.642 | Destabilizing | None | N | 0.141 | neutral | N | 0.494383726 | None | None | I |
I/M | 0.2049 | likely_benign | 0.1746 | benign | -0.79 | Destabilizing | 0.012 | N | 0.314 | neutral | N | 0.48617699 | None | None | I |
I/N | 0.9707 | likely_pathogenic | 0.9613 | pathogenic | -1.251 | Destabilizing | 0.741 | D | 0.64 | neutral | N | 0.516144529 | None | None | I |
I/P | 0.9906 | likely_pathogenic | 0.9875 | pathogenic | -1.0 | Destabilizing | 0.791 | D | 0.645 | neutral | None | None | None | None | I |
I/Q | 0.9839 | likely_pathogenic | 0.9776 | pathogenic | -1.169 | Destabilizing | 0.555 | D | 0.647 | neutral | None | None | None | None | I |
I/R | 0.9736 | likely_pathogenic | 0.9667 | pathogenic | -0.809 | Destabilizing | 0.555 | D | 0.635 | neutral | None | None | None | None | I |
I/S | 0.9506 | likely_pathogenic | 0.9351 | pathogenic | -2.073 | Highly Destabilizing | 0.211 | N | 0.63 | neutral | D | 0.526325573 | None | None | I |
I/T | 0.9059 | likely_pathogenic | 0.8713 | pathogenic | -1.782 | Destabilizing | 0.117 | N | 0.574 | neutral | D | 0.528672445 | None | None | I |
I/V | 0.0893 | likely_benign | 0.0812 | benign | -1.0 | Destabilizing | 0.012 | N | 0.331 | neutral | N | 0.473008376 | None | None | I |
I/W | 0.9592 | likely_pathogenic | 0.947 | pathogenic | -1.053 | Destabilizing | 0.935 | D | 0.641 | neutral | None | None | None | None | I |
I/Y | 0.8637 | likely_pathogenic | 0.8374 | pathogenic | -0.832 | Destabilizing | 0.081 | N | 0.627 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.