Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22638 | 68137;68138;68139 | chr2:178579118;178579117;178579116 | chr2:179443845;179443844;179443843 |
N2AB | 20997 | 63214;63215;63216 | chr2:178579118;178579117;178579116 | chr2:179443845;179443844;179443843 |
N2A | 20070 | 60433;60434;60435 | chr2:178579118;178579117;178579116 | chr2:179443845;179443844;179443843 |
N2B | 13573 | 40942;40943;40944 | chr2:178579118;178579117;178579116 | chr2:179443845;179443844;179443843 |
Novex-1 | 13698 | 41317;41318;41319 | chr2:178579118;178579117;178579116 | chr2:179443845;179443844;179443843 |
Novex-2 | 13765 | 41518;41519;41520 | chr2:178579118;178579117;178579116 | chr2:179443845;179443844;179443843 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | rs2047107763 | None | 0.966 | N | 0.755 | 0.482 | 0.801924819766 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
I/V | rs1300737822 | None | 0.005 | N | 0.244 | 0.072 | 0.336647302497 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs1300737822 | None | 0.005 | N | 0.244 | 0.072 | 0.336647302497 | gnomAD-4.0.0 | 6.5754E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47119E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9298 | likely_pathogenic | 0.9331 | pathogenic | -2.296 | Highly Destabilizing | 0.525 | D | 0.578 | neutral | None | None | None | None | I |
I/C | 0.9102 | likely_pathogenic | 0.9196 | pathogenic | -1.599 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | I |
I/D | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -2.062 | Highly Destabilizing | 0.991 | D | 0.769 | deleterious | None | None | None | None | I |
I/E | 0.9948 | likely_pathogenic | 0.995 | pathogenic | -1.831 | Destabilizing | 0.974 | D | 0.754 | deleterious | None | None | None | None | I |
I/F | 0.4157 | ambiguous | 0.4279 | ambiguous | -1.338 | Destabilizing | 0.949 | D | 0.607 | neutral | None | None | None | None | I |
I/G | 0.9896 | likely_pathogenic | 0.9901 | pathogenic | -2.854 | Highly Destabilizing | 0.974 | D | 0.755 | deleterious | None | None | None | None | I |
I/H | 0.9913 | likely_pathogenic | 0.9919 | pathogenic | -2.191 | Highly Destabilizing | 0.998 | D | 0.766 | deleterious | None | None | None | None | I |
I/K | 0.9898 | likely_pathogenic | 0.9898 | pathogenic | -1.599 | Destabilizing | 0.966 | D | 0.755 | deleterious | N | 0.478559763 | None | None | I |
I/L | 0.1877 | likely_benign | 0.1928 | benign | -0.697 | Destabilizing | 0.002 | N | 0.275 | neutral | N | 0.398103454 | None | None | I |
I/M | 0.2212 | likely_benign | 0.2245 | benign | -0.678 | Destabilizing | 0.934 | D | 0.615 | neutral | N | 0.477799295 | None | None | I |
I/N | 0.9835 | likely_pathogenic | 0.9827 | pathogenic | -1.907 | Destabilizing | 0.991 | D | 0.78 | deleterious | None | None | None | None | I |
I/P | 0.9931 | likely_pathogenic | 0.9934 | pathogenic | -1.209 | Destabilizing | 0.991 | D | 0.776 | deleterious | None | None | None | None | I |
I/Q | 0.9885 | likely_pathogenic | 0.9886 | pathogenic | -1.741 | Destabilizing | 0.991 | D | 0.775 | deleterious | None | None | None | None | I |
I/R | 0.983 | likely_pathogenic | 0.9835 | pathogenic | -1.409 | Destabilizing | 0.966 | D | 0.779 | deleterious | N | 0.478559763 | None | None | I |
I/S | 0.973 | likely_pathogenic | 0.9738 | pathogenic | -2.702 | Highly Destabilizing | 0.974 | D | 0.721 | prob.delet. | None | None | None | None | I |
I/T | 0.9395 | likely_pathogenic | 0.9396 | pathogenic | -2.306 | Highly Destabilizing | 0.801 | D | 0.627 | neutral | N | 0.478559763 | None | None | I |
I/V | 0.0748 | likely_benign | 0.0778 | benign | -1.209 | Destabilizing | 0.005 | N | 0.244 | neutral | N | 0.405179434 | None | None | I |
I/W | 0.9779 | likely_pathogenic | 0.9808 | pathogenic | -1.625 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | I |
I/Y | 0.9388 | likely_pathogenic | 0.9457 | pathogenic | -1.322 | Destabilizing | 0.974 | D | 0.699 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.