Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22648 | 68167;68168;68169 | chr2:178579088;178579087;178579086 | chr2:179443815;179443814;179443813 |
N2AB | 21007 | 63244;63245;63246 | chr2:178579088;178579087;178579086 | chr2:179443815;179443814;179443813 |
N2A | 20080 | 60463;60464;60465 | chr2:178579088;178579087;178579086 | chr2:179443815;179443814;179443813 |
N2B | 13583 | 40972;40973;40974 | chr2:178579088;178579087;178579086 | chr2:179443815;179443814;179443813 |
Novex-1 | 13708 | 41347;41348;41349 | chr2:178579088;178579087;178579086 | chr2:179443815;179443814;179443813 |
Novex-2 | 13775 | 41548;41549;41550 | chr2:178579088;178579087;178579086 | chr2:179443815;179443814;179443813 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.998 | N | 0.692 | 0.233 | 0.283761946502 | gnomAD-4.0.0 | 1.71096E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.24906E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0769 | likely_benign | 0.0744 | benign | -0.627 | Destabilizing | 0.962 | D | 0.505 | neutral | N | 0.465193316 | None | None | N |
T/C | 0.325 | likely_benign | 0.3151 | benign | -0.393 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
T/D | 0.3973 | ambiguous | 0.3623 | ambiguous | -0.159 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/E | 0.2511 | likely_benign | 0.2294 | benign | -0.134 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/F | 0.3094 | likely_benign | 0.2873 | benign | -0.592 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
T/G | 0.1994 | likely_benign | 0.1994 | benign | -0.913 | Destabilizing | 0.994 | D | 0.619 | neutral | None | None | None | None | N |
T/H | 0.3227 | likely_benign | 0.2997 | benign | -1.234 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
T/I | 0.154 | likely_benign | 0.1368 | benign | 0.047 | Stabilizing | 0.999 | D | 0.782 | deleterious | N | 0.472388648 | None | None | N |
T/K | 0.2118 | likely_benign | 0.1895 | benign | -0.761 | Destabilizing | 0.998 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/L | 0.1043 | likely_benign | 0.1013 | benign | 0.047 | Stabilizing | 0.997 | D | 0.596 | neutral | None | None | None | None | N |
T/M | 0.0959 | likely_benign | 0.0924 | benign | 0.128 | Stabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
T/N | 0.1564 | likely_benign | 0.1462 | benign | -0.717 | Destabilizing | 0.998 | D | 0.692 | prob.neutral | N | 0.432390252 | None | None | N |
T/P | 0.3422 | ambiguous | 0.3648 | ambiguous | -0.144 | Destabilizing | 0.999 | D | 0.779 | deleterious | N | 0.383654942 | None | None | N |
T/Q | 0.2164 | likely_benign | 0.2031 | benign | -0.756 | Destabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | N |
T/R | 0.1901 | likely_benign | 0.1695 | benign | -0.656 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
T/S | 0.1044 | likely_benign | 0.1006 | benign | -0.94 | Destabilizing | 0.825 | D | 0.329 | neutral | N | 0.422173258 | None | None | N |
T/V | 0.1011 | likely_benign | 0.097 | benign | -0.144 | Destabilizing | 0.997 | D | 0.576 | neutral | None | None | None | None | N |
T/W | 0.6756 | likely_pathogenic | 0.6627 | pathogenic | -0.625 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
T/Y | 0.3674 | ambiguous | 0.346 | ambiguous | -0.373 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.