Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22650 | 68173;68174;68175 | chr2:178579082;178579081;178579080 | chr2:179443809;179443808;179443807 |
N2AB | 21009 | 63250;63251;63252 | chr2:178579082;178579081;178579080 | chr2:179443809;179443808;179443807 |
N2A | 20082 | 60469;60470;60471 | chr2:178579082;178579081;178579080 | chr2:179443809;179443808;179443807 |
N2B | 13585 | 40978;40979;40980 | chr2:178579082;178579081;178579080 | chr2:179443809;179443808;179443807 |
Novex-1 | 13710 | 41353;41354;41355 | chr2:178579082;178579081;178579080 | chr2:179443809;179443808;179443807 |
Novex-2 | 13777 | 41554;41555;41556 | chr2:178579082;178579081;178579080 | chr2:179443809;179443808;179443807 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | N | 0.814 | 0.439 | 0.37568098594 | gnomAD-4.0.0 | 2.05315E-06 | None | None | None | None | N | None | 0 | 6.71141E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3241 | likely_benign | 0.3014 | benign | -0.481 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.483485559 | None | None | N |
P/C | 0.8273 | likely_pathogenic | 0.7946 | pathogenic | -0.817 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
P/D | 0.7121 | likely_pathogenic | 0.6941 | pathogenic | -0.329 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/E | 0.6037 | likely_pathogenic | 0.5668 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/F | 0.8788 | likely_pathogenic | 0.842 | pathogenic | -0.625 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
P/G | 0.702 | likely_pathogenic | 0.682 | pathogenic | -0.604 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
P/H | 0.5634 | ambiguous | 0.522 | ambiguous | -0.055 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
P/I | 0.6908 | likely_pathogenic | 0.6348 | pathogenic | -0.299 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
P/K | 0.656 | likely_pathogenic | 0.6136 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
P/L | 0.4267 | ambiguous | 0.3751 | ambiguous | -0.299 | Destabilizing | 1.0 | D | 0.832 | deleterious | N | 0.5118888 | None | None | N |
P/M | 0.6744 | likely_pathogenic | 0.6251 | pathogenic | -0.551 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
P/N | 0.6471 | likely_pathogenic | 0.6241 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
P/Q | 0.5077 | ambiguous | 0.463 | ambiguous | -0.578 | Destabilizing | 1.0 | D | 0.802 | deleterious | N | 0.48663911 | None | None | N |
P/R | 0.5438 | ambiguous | 0.5098 | ambiguous | -0.023 | Destabilizing | 1.0 | D | 0.836 | deleterious | N | 0.484246027 | None | None | N |
P/S | 0.4692 | ambiguous | 0.449 | ambiguous | -0.728 | Destabilizing | 1.0 | D | 0.814 | deleterious | N | 0.482017528 | None | None | N |
P/T | 0.3434 | ambiguous | 0.3198 | benign | -0.723 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.474775826 | None | None | N |
P/V | 0.5532 | ambiguous | 0.5105 | ambiguous | -0.328 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
P/W | 0.9414 | likely_pathogenic | 0.9279 | pathogenic | -0.696 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
P/Y | 0.8462 | likely_pathogenic | 0.8165 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.