Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22656 | 68191;68192;68193 | chr2:178579064;178579063;178579062 | chr2:179443791;179443790;179443789 |
N2AB | 21015 | 63268;63269;63270 | chr2:178579064;178579063;178579062 | chr2:179443791;179443790;179443789 |
N2A | 20088 | 60487;60488;60489 | chr2:178579064;178579063;178579062 | chr2:179443791;179443790;179443789 |
N2B | 13591 | 40996;40997;40998 | chr2:178579064;178579063;178579062 | chr2:179443791;179443790;179443789 |
Novex-1 | 13716 | 41371;41372;41373 | chr2:178579064;178579063;178579062 | chr2:179443791;179443790;179443789 |
Novex-2 | 13783 | 41572;41573;41574 | chr2:178579064;178579063;178579062 | chr2:179443791;179443790;179443789 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs758038684 | -2.029 | 0.999 | N | 0.727 | 0.548 | 0.811529650169 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
V/D | rs758038684 | -2.029 | 0.999 | N | 0.727 | 0.548 | 0.811529650169 | gnomAD-4.0.0 | 1.09505E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.43942E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4433 | ambiguous | 0.4101 | ambiguous | -1.644 | Destabilizing | 0.948 | D | 0.493 | neutral | N | 0.510614254 | None | None | N |
V/C | 0.84 | likely_pathogenic | 0.8288 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
V/D | 0.8094 | likely_pathogenic | 0.7794 | pathogenic | -1.697 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | N | 0.520609576 | None | None | N |
V/E | 0.638 | likely_pathogenic | 0.5898 | pathogenic | -1.701 | Destabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
V/F | 0.4171 | ambiguous | 0.3666 | ambiguous | -1.418 | Destabilizing | 0.997 | D | 0.64 | neutral | N | 0.489783117 | None | None | N |
V/G | 0.5411 | ambiguous | 0.529 | ambiguous | -1.971 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | N | 0.491998389 | None | None | N |
V/H | 0.8782 | likely_pathogenic | 0.859 | pathogenic | -1.561 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/I | 0.0719 | likely_benign | 0.0678 | benign | -0.835 | Destabilizing | 0.198 | N | 0.19 | neutral | N | 0.450813802 | None | None | N |
V/K | 0.6428 | likely_pathogenic | 0.6021 | pathogenic | -1.315 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
V/L | 0.3569 | ambiguous | 0.3119 | benign | -0.835 | Destabilizing | 0.9 | D | 0.313 | neutral | N | 0.516654792 | None | None | N |
V/M | 0.2286 | likely_benign | 0.1934 | benign | -0.581 | Destabilizing | 0.998 | D | 0.566 | neutral | None | None | None | None | N |
V/N | 0.6494 | likely_pathogenic | 0.6249 | pathogenic | -1.115 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/P | 0.8482 | likely_pathogenic | 0.7756 | pathogenic | -1.071 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
V/Q | 0.6568 | likely_pathogenic | 0.623 | pathogenic | -1.316 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
V/R | 0.6568 | likely_pathogenic | 0.6327 | pathogenic | -0.789 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/S | 0.6108 | likely_pathogenic | 0.5909 | pathogenic | -1.64 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
V/T | 0.4342 | ambiguous | 0.3988 | ambiguous | -1.533 | Destabilizing | 0.992 | D | 0.505 | neutral | None | None | None | None | N |
V/W | 0.9431 | likely_pathogenic | 0.9276 | pathogenic | -1.614 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
V/Y | 0.7862 | likely_pathogenic | 0.7584 | pathogenic | -1.322 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.