Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22658 | 68197;68198;68199 | chr2:178579058;178579057;178579056 | chr2:179443785;179443784;179443783 |
N2AB | 21017 | 63274;63275;63276 | chr2:178579058;178579057;178579056 | chr2:179443785;179443784;179443783 |
N2A | 20090 | 60493;60494;60495 | chr2:178579058;178579057;178579056 | chr2:179443785;179443784;179443783 |
N2B | 13593 | 41002;41003;41004 | chr2:178579058;178579057;178579056 | chr2:179443785;179443784;179443783 |
Novex-1 | 13718 | 41377;41378;41379 | chr2:178579058;178579057;178579056 | chr2:179443785;179443784;179443783 |
Novex-2 | 13785 | 41578;41579;41580 | chr2:178579058;178579057;178579056 | chr2:179443785;179443784;179443783 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | N | 0.761 | 0.378 | 0.406806705197 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5582 | ambiguous | 0.5627 | ambiguous | -0.953 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
A/D | 0.7598 | likely_pathogenic | 0.7902 | pathogenic | -1.985 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
A/E | 0.6422 | likely_pathogenic | 0.6496 | pathogenic | -2.068 | Highly Destabilizing | 1.0 | D | 0.79 | deleterious | N | 0.493140427 | None | None | N |
A/F | 0.727 | likely_pathogenic | 0.7114 | pathogenic | -1.313 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
A/G | 0.2259 | likely_benign | 0.2374 | benign | -1.137 | Destabilizing | 1.0 | D | 0.539 | neutral | N | 0.46947692 | None | None | N |
A/H | 0.7882 | likely_pathogenic | 0.7973 | pathogenic | -1.198 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
A/I | 0.5243 | ambiguous | 0.4917 | ambiguous | -0.604 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
A/K | 0.751 | likely_pathogenic | 0.7404 | pathogenic | -1.226 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
A/L | 0.4742 | ambiguous | 0.4494 | ambiguous | -0.604 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
A/M | 0.4602 | ambiguous | 0.4372 | ambiguous | -0.32 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
A/N | 0.5789 | likely_pathogenic | 0.6073 | pathogenic | -0.986 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
A/P | 0.436 | ambiguous | 0.4477 | ambiguous | -0.684 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.49383386 | None | None | N |
A/Q | 0.6358 | likely_pathogenic | 0.635 | pathogenic | -1.3 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
A/R | 0.6691 | likely_pathogenic | 0.6703 | pathogenic | -0.711 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
A/S | 0.112 | likely_benign | 0.118 | benign | -1.175 | Destabilizing | 1.0 | D | 0.549 | neutral | N | 0.472013006 | None | None | N |
A/T | 0.2021 | likely_benign | 0.1963 | benign | -1.195 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.467165276 | None | None | N |
A/V | 0.2511 | likely_benign | 0.2451 | benign | -0.684 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.479664125 | None | None | N |
A/W | 0.9315 | likely_pathogenic | 0.9257 | pathogenic | -1.574 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
A/Y | 0.8133 | likely_pathogenic | 0.801 | pathogenic | -1.219 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.