Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22659 | 68200;68201;68202 | chr2:178579055;178579054;178579053 | chr2:179443782;179443781;179443780 |
N2AB | 21018 | 63277;63278;63279 | chr2:178579055;178579054;178579053 | chr2:179443782;179443781;179443780 |
N2A | 20091 | 60496;60497;60498 | chr2:178579055;178579054;178579053 | chr2:179443782;179443781;179443780 |
N2B | 13594 | 41005;41006;41007 | chr2:178579055;178579054;178579053 | chr2:179443782;179443781;179443780 |
Novex-1 | 13719 | 41380;41381;41382 | chr2:178579055;178579054;178579053 | chr2:179443782;179443781;179443780 |
Novex-2 | 13786 | 41581;41582;41583 | chr2:178579055;178579054;178579053 | chr2:179443782;179443781;179443780 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1440927665 | -0.26 | None | N | 0.097 | 0.122 | 0.0482279557977 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1440927665 | -0.26 | None | N | 0.097 | 0.122 | 0.0482279557977 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1440927665 | -0.26 | None | N | 0.097 | 0.122 | 0.0482279557977 | gnomAD-4.0.0 | 1.31527E-05 | None | None | None | None | N | None | 4.82556E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs778462661 | None | 0.324 | N | 0.448 | 0.257 | 0.215869574891 | gnomAD-4.0.0 | 1.59244E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86012E-06 | 0 | 0 |
E/Q | None | None | 0.324 | N | 0.444 | 0.207 | 0.152612264143 | gnomAD-4.0.0 | 1.59244E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86012E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2698 | likely_benign | 0.2845 | benign | -0.471 | Destabilizing | 0.324 | N | 0.429 | neutral | N | 0.468956845 | None | None | N |
E/C | 0.9043 | likely_pathogenic | 0.9115 | pathogenic | -0.019 | Destabilizing | 0.981 | D | 0.466 | neutral | None | None | None | None | N |
E/D | 0.0735 | likely_benign | 0.078 | benign | -0.703 | Destabilizing | None | N | 0.097 | neutral | N | 0.374390459 | None | None | N |
E/F | 0.8526 | likely_pathogenic | 0.8622 | pathogenic | -0.464 | Destabilizing | 0.932 | D | 0.409 | neutral | None | None | None | None | N |
E/G | 0.2367 | likely_benign | 0.2463 | benign | -0.736 | Destabilizing | 0.324 | N | 0.427 | neutral | N | 0.458643851 | None | None | N |
E/H | 0.618 | likely_pathogenic | 0.6531 | pathogenic | -0.714 | Destabilizing | 0.932 | D | 0.368 | neutral | None | None | None | None | N |
E/I | 0.6391 | likely_pathogenic | 0.6568 | pathogenic | 0.213 | Stabilizing | 0.818 | D | 0.423 | neutral | None | None | None | None | N |
E/K | 0.342 | ambiguous | 0.3906 | ambiguous | -0.176 | Destabilizing | 0.324 | N | 0.448 | neutral | N | 0.48729189 | None | None | N |
E/L | 0.5903 | likely_pathogenic | 0.6006 | pathogenic | 0.213 | Stabilizing | 0.818 | D | 0.418 | neutral | None | None | None | None | N |
E/M | 0.6475 | likely_pathogenic | 0.6661 | pathogenic | 0.589 | Stabilizing | 0.981 | D | 0.361 | neutral | None | None | None | None | N |
E/N | 0.2327 | likely_benign | 0.2543 | benign | -0.349 | Destabilizing | 0.241 | N | 0.403 | neutral | None | None | None | None | N |
E/P | 0.9134 | likely_pathogenic | 0.9173 | pathogenic | 0.007 | Stabilizing | 0.818 | D | 0.409 | neutral | None | None | None | None | N |
E/Q | 0.265 | likely_benign | 0.287 | benign | -0.301 | Destabilizing | 0.324 | N | 0.444 | neutral | N | 0.474074664 | None | None | N |
E/R | 0.5055 | ambiguous | 0.5536 | ambiguous | -0.069 | Destabilizing | 0.69 | D | 0.404 | neutral | None | None | None | None | N |
E/S | 0.2298 | likely_benign | 0.2492 | benign | -0.59 | Destabilizing | 0.116 | N | 0.412 | neutral | None | None | None | None | N |
E/T | 0.2837 | likely_benign | 0.2906 | benign | -0.39 | Destabilizing | 0.388 | N | 0.419 | neutral | None | None | None | None | N |
E/V | 0.4145 | ambiguous | 0.435 | ambiguous | 0.007 | Stabilizing | 0.773 | D | 0.393 | neutral | N | 0.50980339 | None | None | N |
E/W | 0.9441 | likely_pathogenic | 0.9516 | pathogenic | -0.396 | Destabilizing | 0.981 | D | 0.564 | neutral | None | None | None | None | N |
E/Y | 0.7268 | likely_pathogenic | 0.7469 | pathogenic | -0.259 | Destabilizing | 0.932 | D | 0.389 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.