Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22662 | 68209;68210;68211 | chr2:178579046;178579045;178579044 | chr2:179443773;179443772;179443771 |
N2AB | 21021 | 63286;63287;63288 | chr2:178579046;178579045;178579044 | chr2:179443773;179443772;179443771 |
N2A | 20094 | 60505;60506;60507 | chr2:178579046;178579045;178579044 | chr2:179443773;179443772;179443771 |
N2B | 13597 | 41014;41015;41016 | chr2:178579046;178579045;178579044 | chr2:179443773;179443772;179443771 |
Novex-1 | 13722 | 41389;41390;41391 | chr2:178579046;178579045;178579044 | chr2:179443773;179443772;179443771 |
Novex-2 | 13789 | 41590;41591;41592 | chr2:178579046;178579045;178579044 | chr2:179443773;179443772;179443771 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs1484148632 | None | 1.0 | N | 0.695 | 0.616 | 0.478828542108 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/P | rs1484148632 | None | 1.0 | N | 0.695 | 0.616 | 0.478828542108 | gnomAD-4.0.0 | 6.57566E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47119E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1882 | likely_benign | 0.146 | benign | -0.977 | Destabilizing | 0.999 | D | 0.548 | neutral | N | 0.514326563 | None | None | N |
T/C | 0.4709 | ambiguous | 0.3996 | ambiguous | -1.106 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
T/D | 0.7349 | likely_pathogenic | 0.6375 | pathogenic | -2.032 | Highly Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
T/E | 0.6317 | likely_pathogenic | 0.5361 | ambiguous | -1.893 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
T/F | 0.3664 | ambiguous | 0.274 | benign | -0.646 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
T/G | 0.5173 | ambiguous | 0.4335 | ambiguous | -1.329 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
T/H | 0.4083 | ambiguous | 0.3363 | benign | -1.505 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
T/I | 0.178 | likely_benign | 0.1271 | benign | -0.082 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.499954543 | None | None | N |
T/K | 0.5282 | ambiguous | 0.4243 | ambiguous | -1.02 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/L | 0.1251 | likely_benign | 0.101 | benign | -0.082 | Destabilizing | 0.999 | D | 0.624 | neutral | None | None | None | None | N |
T/M | 0.0966 | likely_benign | 0.0857 | benign | -0.096 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/N | 0.2011 | likely_benign | 0.16 | benign | -1.587 | Destabilizing | 1.0 | D | 0.645 | neutral | N | 0.476372442 | None | None | N |
T/P | 0.7853 | likely_pathogenic | 0.6649 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.502732357 | None | None | N |
T/Q | 0.4294 | ambiguous | 0.3555 | ambiguous | -1.517 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
T/R | 0.4949 | ambiguous | 0.3831 | ambiguous | -0.985 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/S | 0.1905 | likely_benign | 0.1689 | benign | -1.652 | Destabilizing | 0.999 | D | 0.543 | neutral | N | 0.510784825 | None | None | N |
T/V | 0.1459 | likely_benign | 0.113 | benign | -0.349 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | N |
T/W | 0.7493 | likely_pathogenic | 0.6721 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
T/Y | 0.4158 | ambiguous | 0.3289 | benign | -0.477 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.