Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22663 | 68212;68213;68214 | chr2:178579043;178579042;178579041 | chr2:179443770;179443769;179443768 |
N2AB | 21022 | 63289;63290;63291 | chr2:178579043;178579042;178579041 | chr2:179443770;179443769;179443768 |
N2A | 20095 | 60508;60509;60510 | chr2:178579043;178579042;178579041 | chr2:179443770;179443769;179443768 |
N2B | 13598 | 41017;41018;41019 | chr2:178579043;178579042;178579041 | chr2:179443770;179443769;179443768 |
Novex-1 | 13723 | 41392;41393;41394 | chr2:178579043;178579042;178579041 | chr2:179443770;179443769;179443768 |
Novex-2 | 13790 | 41593;41594;41595 | chr2:178579043;178579042;178579041 | chr2:179443770;179443769;179443768 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1485610846 | -1.54 | 0.999 | N | 0.734 | 0.4 | 0.529311486226 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/F | rs1485610846 | -1.54 | 0.999 | N | 0.734 | 0.4 | 0.529311486226 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/F | rs1485610846 | -1.54 | 0.999 | N | 0.734 | 0.4 | 0.529311486226 | gnomAD-4.0.0 | 5.12785E-06 | None | None | None | None | N | None | 6.76888E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8726 | likely_pathogenic | 0.839 | pathogenic | -2.683 | Highly Destabilizing | 0.994 | D | 0.708 | prob.delet. | None | None | None | None | N |
L/C | 0.7755 | likely_pathogenic | 0.7556 | pathogenic | -1.657 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -3.36 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/E | 0.9971 | likely_pathogenic | 0.9957 | pathogenic | -3.036 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/F | 0.4965 | ambiguous | 0.4064 | ambiguous | -1.641 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | N | 0.493730953 | None | None | N |
L/G | 0.9852 | likely_pathogenic | 0.9798 | pathogenic | -3.264 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
L/H | 0.9925 | likely_pathogenic | 0.9886 | pathogenic | -3.082 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/I | 0.1171 | likely_benign | 0.1046 | benign | -0.911 | Destabilizing | 0.962 | D | 0.573 | neutral | N | 0.483259868 | None | None | N |
L/K | 0.9964 | likely_pathogenic | 0.9947 | pathogenic | -2.065 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/M | 0.1945 | likely_benign | 0.1733 | benign | -1.1 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
L/N | 0.9973 | likely_pathogenic | 0.9963 | pathogenic | -2.864 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
L/P | 0.9959 | likely_pathogenic | 0.9922 | pathogenic | -1.497 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
L/Q | 0.9859 | likely_pathogenic | 0.9796 | pathogenic | -2.441 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/R | 0.9916 | likely_pathogenic | 0.9872 | pathogenic | -2.282 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
L/S | 0.9875 | likely_pathogenic | 0.9808 | pathogenic | -3.271 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | D | 0.534498593 | None | None | N |
L/T | 0.9409 | likely_pathogenic | 0.9257 | pathogenic | -2.785 | Highly Destabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | N |
L/V | 0.1098 | likely_benign | 0.1025 | benign | -1.497 | Destabilizing | 0.619 | D | 0.348 | neutral | N | 0.455974479 | None | None | N |
L/W | 0.9716 | likely_pathogenic | 0.9555 | pathogenic | -1.961 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/Y | 0.9744 | likely_pathogenic | 0.9597 | pathogenic | -1.839 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.