Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22667 | 68224;68225;68226 | chr2:178579031;178579030;178579029 | chr2:179443758;179443757;179443756 |
N2AB | 21026 | 63301;63302;63303 | chr2:178579031;178579030;178579029 | chr2:179443758;179443757;179443756 |
N2A | 20099 | 60520;60521;60522 | chr2:178579031;178579030;178579029 | chr2:179443758;179443757;179443756 |
N2B | 13602 | 41029;41030;41031 | chr2:178579031;178579030;178579029 | chr2:179443758;179443757;179443756 |
Novex-1 | 13727 | 41404;41405;41406 | chr2:178579031;178579030;178579029 | chr2:179443758;179443757;179443756 |
Novex-2 | 13794 | 41605;41606;41607 | chr2:178579031;178579030;178579029 | chr2:179443758;179443757;179443756 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | None | None | 1.0 | N | 0.866 | 0.446 | 0.554037457546 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0596 | likely_benign | 0.0558 | benign | -1.554 | Destabilizing | 0.996 | D | 0.625 | neutral | N | 0.48995098 | None | None | N |
P/C | 0.4653 | ambiguous | 0.4085 | ambiguous | -1.074 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
P/D | 0.6129 | likely_pathogenic | 0.5722 | pathogenic | -1.562 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
P/E | 0.2968 | likely_benign | 0.2697 | benign | -1.501 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
P/F | 0.5383 | ambiguous | 0.4491 | ambiguous | -1.114 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
P/G | 0.4066 | ambiguous | 0.3349 | benign | -1.915 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
P/H | 0.3045 | likely_benign | 0.2492 | benign | -1.386 | Destabilizing | 1.0 | D | 0.866 | deleterious | N | 0.501863892 | None | None | N |
P/I | 0.204 | likely_benign | 0.1895 | benign | -0.634 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
P/K | 0.3146 | likely_benign | 0.2887 | benign | -1.381 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
P/L | 0.1129 | likely_benign | 0.0956 | benign | -0.634 | Destabilizing | 0.998 | D | 0.787 | deleterious | N | 0.501356913 | None | None | N |
P/M | 0.2483 | likely_benign | 0.2159 | benign | -0.57 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
P/N | 0.4522 | ambiguous | 0.3931 | ambiguous | -1.301 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
P/Q | 0.18 | likely_benign | 0.1535 | benign | -1.371 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
P/R | 0.2518 | likely_benign | 0.223 | benign | -0.929 | Destabilizing | 1.0 | D | 0.885 | deleterious | N | 0.485632514 | None | None | N |
P/S | 0.1384 | likely_benign | 0.1193 | benign | -1.806 | Destabilizing | 0.999 | D | 0.817 | deleterious | N | 0.487354035 | None | None | N |
P/T | 0.1205 | likely_benign | 0.1078 | benign | -1.618 | Destabilizing | 0.999 | D | 0.781 | deleterious | N | 0.487607524 | None | None | N |
P/V | 0.1362 | likely_benign | 0.1278 | benign | -0.908 | Destabilizing | 0.91 | D | 0.451 | neutral | None | None | None | None | N |
P/W | 0.7973 | likely_pathogenic | 0.7197 | pathogenic | -1.353 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/Y | 0.556 | ambiguous | 0.4668 | ambiguous | -1.041 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.