Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2267 | 7024;7025;7026 | chr2:178774465;178774464;178774463 | chr2:179639192;179639191;179639190 |
N2AB | 2267 | 7024;7025;7026 | chr2:178774465;178774464;178774463 | chr2:179639192;179639191;179639190 |
N2A | 2267 | 7024;7025;7026 | chr2:178774465;178774464;178774463 | chr2:179639192;179639191;179639190 |
N2B | 2221 | 6886;6887;6888 | chr2:178774465;178774464;178774463 | chr2:179639192;179639191;179639190 |
Novex-1 | 2221 | 6886;6887;6888 | chr2:178774465;178774464;178774463 | chr2:179639192;179639191;179639190 |
Novex-2 | 2221 | 6886;6887;6888 | chr2:178774465;178774464;178774463 | chr2:179639192;179639191;179639190 |
Novex-3 | 2267 | 7024;7025;7026 | chr2:178774465;178774464;178774463 | chr2:179639192;179639191;179639190 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.165 | N | 0.371 | 0.271 | 0.519514513453 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1284 | likely_benign | 0.1264 | benign | -1.233 | Destabilizing | 0.165 | N | 0.371 | neutral | N | 0.497713941 | None | None | N |
V/C | 0.6786 | likely_pathogenic | 0.6639 | pathogenic | -0.881 | Destabilizing | 0.981 | D | 0.313 | neutral | None | None | None | None | N |
V/D | 0.422 | ambiguous | 0.4182 | ambiguous | -0.931 | Destabilizing | 0.773 | D | 0.377 | neutral | N | 0.511912347 | None | None | N |
V/E | 0.3375 | likely_benign | 0.3292 | benign | -0.872 | Destabilizing | 0.818 | D | 0.36 | neutral | None | None | None | None | N |
V/F | 0.1774 | likely_benign | 0.1733 | benign | -0.803 | Destabilizing | 0.627 | D | 0.339 | neutral | N | 0.510105269 | None | None | N |
V/G | 0.2381 | likely_benign | 0.234 | benign | -1.563 | Destabilizing | 0.773 | D | 0.364 | neutral | N | 0.510958047 | None | None | N |
V/H | 0.5679 | likely_pathogenic | 0.5587 | ambiguous | -0.913 | Destabilizing | 0.981 | D | 0.352 | neutral | None | None | None | None | N |
V/I | 0.0716 | likely_benign | 0.0709 | benign | -0.406 | Destabilizing | 0.001 | N | 0.185 | neutral | N | 0.4727538 | None | None | N |
V/K | 0.3342 | likely_benign | 0.3308 | benign | -0.932 | Destabilizing | 0.818 | D | 0.363 | neutral | None | None | None | None | N |
V/L | 0.16 | likely_benign | 0.1535 | benign | -0.406 | Destabilizing | None | N | 0.132 | neutral | N | 0.450369091 | None | None | N |
V/M | 0.1359 | likely_benign | 0.131 | benign | -0.561 | Destabilizing | 0.69 | D | 0.353 | neutral | None | None | None | None | N |
V/N | 0.2959 | likely_benign | 0.2916 | benign | -0.865 | Destabilizing | 0.932 | D | 0.363 | neutral | None | None | None | None | N |
V/P | 0.2637 | likely_benign | 0.2577 | benign | -0.649 | Destabilizing | 0.932 | D | 0.363 | neutral | None | None | None | None | N |
V/Q | 0.3598 | ambiguous | 0.3539 | ambiguous | -0.907 | Destabilizing | 0.932 | D | 0.347 | neutral | None | None | None | None | N |
V/R | 0.3151 | likely_benign | 0.3068 | benign | -0.584 | Destabilizing | 0.818 | D | 0.369 | neutral | None | None | None | None | N |
V/S | 0.2098 | likely_benign | 0.2048 | benign | -1.392 | Destabilizing | 0.563 | D | 0.371 | neutral | None | None | None | None | N |
V/T | 0.1324 | likely_benign | 0.1285 | benign | -1.203 | Destabilizing | 0.388 | N | 0.327 | neutral | None | None | None | None | N |
V/W | 0.7542 | likely_pathogenic | 0.7354 | pathogenic | -0.979 | Destabilizing | 0.981 | D | 0.403 | neutral | None | None | None | None | N |
V/Y | 0.5195 | ambiguous | 0.5072 | ambiguous | -0.663 | Destabilizing | 0.818 | D | 0.321 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.