Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2268 | 7027;7028;7029 | chr2:178774462;178774461;178774460 | chr2:179639189;179639188;179639187 |
N2AB | 2268 | 7027;7028;7029 | chr2:178774462;178774461;178774460 | chr2:179639189;179639188;179639187 |
N2A | 2268 | 7027;7028;7029 | chr2:178774462;178774461;178774460 | chr2:179639189;179639188;179639187 |
N2B | 2222 | 6889;6890;6891 | chr2:178774462;178774461;178774460 | chr2:179639189;179639188;179639187 |
Novex-1 | 2222 | 6889;6890;6891 | chr2:178774462;178774461;178774460 | chr2:179639189;179639188;179639187 |
Novex-2 | 2222 | 6889;6890;6891 | chr2:178774462;178774461;178774460 | chr2:179639189;179639188;179639187 |
Novex-3 | 2268 | 7027;7028;7029 | chr2:178774462;178774461;178774460 | chr2:179639189;179639188;179639187 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1288686465 | -0.585 | 0.999 | D | 0.627 | 0.618 | 0.580444438771 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | None | None | 0.999 | N | 0.646 | 0.303 | 0.29385284311 | gnomAD-4.0.0 | 1.59429E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41313E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1821 | likely_benign | 0.1665 | benign | -0.316 | Destabilizing | 0.998 | D | 0.609 | neutral | N | 0.511726249 | None | None | N |
E/C | 0.8491 | likely_pathogenic | 0.817 | pathogenic | -0.174 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/D | 0.1233 | likely_benign | 0.109 | benign | -0.315 | Destabilizing | 0.434 | N | 0.185 | neutral | N | 0.512020307 | None | None | N |
E/F | 0.7684 | likely_pathogenic | 0.7432 | pathogenic | -0.035 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/G | 0.2066 | likely_benign | 0.1938 | benign | -0.527 | Destabilizing | 0.999 | D | 0.627 | neutral | D | 0.582640651 | None | None | N |
E/H | 0.4292 | ambiguous | 0.3906 | ambiguous | 0.299 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/I | 0.4183 | ambiguous | 0.3849 | ambiguous | 0.209 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/K | 0.1819 | likely_benign | 0.1716 | benign | 0.356 | Stabilizing | 0.998 | D | 0.533 | neutral | N | 0.481867867 | None | None | N |
E/L | 0.5023 | ambiguous | 0.4661 | ambiguous | 0.209 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/M | 0.531 | ambiguous | 0.4877 | ambiguous | 0.167 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/N | 0.1985 | likely_benign | 0.1819 | benign | -0.12 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/P | 0.8597 | likely_pathogenic | 0.8538 | pathogenic | 0.054 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/Q | 0.155 | likely_benign | 0.1369 | benign | -0.047 | Destabilizing | 0.999 | D | 0.646 | neutral | N | 0.508220491 | None | None | N |
E/R | 0.3134 | likely_benign | 0.2904 | benign | 0.629 | Stabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/S | 0.1649 | likely_benign | 0.1506 | benign | -0.258 | Destabilizing | 0.997 | D | 0.571 | neutral | None | None | None | None | N |
E/T | 0.1793 | likely_benign | 0.161 | benign | -0.074 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/V | 0.2497 | likely_benign | 0.2275 | benign | 0.054 | Stabilizing | 1.0 | D | 0.671 | neutral | D | 0.534342394 | None | None | N |
E/W | 0.9203 | likely_pathogenic | 0.9006 | pathogenic | 0.153 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/Y | 0.6205 | likely_pathogenic | 0.5875 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.