Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22685 | 68278;68279;68280 | chr2:178578977;178578976;178578975 | chr2:179443704;179443703;179443702 |
N2AB | 21044 | 63355;63356;63357 | chr2:178578977;178578976;178578975 | chr2:179443704;179443703;179443702 |
N2A | 20117 | 60574;60575;60576 | chr2:178578977;178578976;178578975 | chr2:179443704;179443703;179443702 |
N2B | 13620 | 41083;41084;41085 | chr2:178578977;178578976;178578975 | chr2:179443704;179443703;179443702 |
Novex-1 | 13745 | 41458;41459;41460 | chr2:178578977;178578976;178578975 | chr2:179443704;179443703;179443702 |
Novex-2 | 13812 | 41659;41660;41661 | chr2:178578977;178578976;178578975 | chr2:179443704;179443703;179443702 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs866478447 | None | 0.684 | N | 0.383 | 0.252 | 0.32082282376 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs866478447 | None | 0.684 | N | 0.383 | 0.252 | 0.32082282376 | gnomAD-4.0.0 | 6.57999E-06 | None | None | None | None | N | None | 2.41534E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7817 | likely_pathogenic | 0.7074 | pathogenic | -0.302 | Destabilizing | 0.684 | D | 0.456 | neutral | N | 0.521943181 | None | None | N |
D/C | 0.8833 | likely_pathogenic | 0.8715 | pathogenic | -0.325 | Destabilizing | 0.996 | D | 0.535 | neutral | None | None | None | None | N |
D/E | 0.5726 | likely_pathogenic | 0.495 | ambiguous | -0.866 | Destabilizing | 0.007 | N | 0.107 | neutral | N | 0.437169714 | None | None | N |
D/F | 0.9652 | likely_pathogenic | 0.9452 | pathogenic | -0.554 | Destabilizing | 0.953 | D | 0.511 | neutral | None | None | None | None | N |
D/G | 0.7718 | likely_pathogenic | 0.6754 | pathogenic | -0.643 | Destabilizing | 0.684 | D | 0.387 | neutral | D | 0.524522127 | None | None | N |
D/H | 0.8419 | likely_pathogenic | 0.7942 | pathogenic | -1.042 | Destabilizing | 0.015 | N | 0.267 | neutral | N | 0.485118173 | None | None | N |
D/I | 0.9306 | likely_pathogenic | 0.9095 | pathogenic | 0.591 | Stabilizing | 0.953 | D | 0.526 | neutral | None | None | None | None | N |
D/K | 0.9599 | likely_pathogenic | 0.9368 | pathogenic | -0.741 | Destabilizing | 0.59 | D | 0.412 | neutral | None | None | None | None | N |
D/L | 0.9132 | likely_pathogenic | 0.8826 | pathogenic | 0.591 | Stabilizing | 0.742 | D | 0.487 | neutral | None | None | None | None | N |
D/M | 0.9616 | likely_pathogenic | 0.9444 | pathogenic | 1.081 | Stabilizing | 0.996 | D | 0.49 | neutral | None | None | None | None | N |
D/N | 0.4318 | ambiguous | 0.3364 | benign | -0.985 | Destabilizing | 0.684 | D | 0.383 | neutral | N | 0.516825363 | None | None | N |
D/P | 0.9905 | likely_pathogenic | 0.9843 | pathogenic | 0.32 | Stabilizing | 0.953 | D | 0.391 | neutral | None | None | None | None | N |
D/Q | 0.8966 | likely_pathogenic | 0.8518 | pathogenic | -0.778 | Destabilizing | 0.59 | D | 0.367 | neutral | None | None | None | None | N |
D/R | 0.9569 | likely_pathogenic | 0.9369 | pathogenic | -0.855 | Destabilizing | 0.009 | N | 0.249 | neutral | None | None | None | None | N |
D/S | 0.594 | likely_pathogenic | 0.4988 | ambiguous | -1.335 | Destabilizing | 0.742 | D | 0.354 | neutral | None | None | None | None | N |
D/T | 0.8571 | likely_pathogenic | 0.7948 | pathogenic | -1.043 | Destabilizing | 0.742 | D | 0.371 | neutral | None | None | None | None | N |
D/V | 0.8195 | likely_pathogenic | 0.7812 | pathogenic | 0.32 | Stabilizing | 0.939 | D | 0.49 | neutral | N | 0.468495176 | None | None | N |
D/W | 0.9916 | likely_pathogenic | 0.988 | pathogenic | -0.766 | Destabilizing | 0.996 | D | 0.599 | neutral | None | None | None | None | N |
D/Y | 0.783 | likely_pathogenic | 0.727 | pathogenic | -0.426 | Destabilizing | 0.884 | D | 0.532 | neutral | N | 0.509009326 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.