Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22689 | 68290;68291;68292 | chr2:178578965;178578964;178578963 | chr2:179443692;179443691;179443690 |
N2AB | 21048 | 63367;63368;63369 | chr2:178578965;178578964;178578963 | chr2:179443692;179443691;179443690 |
N2A | 20121 | 60586;60587;60588 | chr2:178578965;178578964;178578963 | chr2:179443692;179443691;179443690 |
N2B | 13624 | 41095;41096;41097 | chr2:178578965;178578964;178578963 | chr2:179443692;179443691;179443690 |
Novex-1 | 13749 | 41470;41471;41472 | chr2:178578965;178578964;178578963 | chr2:179443692;179443691;179443690 |
Novex-2 | 13816 | 41671;41672;41673 | chr2:178578965;178578964;178578963 | chr2:179443692;179443691;179443690 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs786205382 | None | 0.822 | N | 0.325 | 0.288 | 0.216624796971 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
N/I | None | None | 0.97 | D | 0.549 | 0.489 | 0.503990602145 | gnomAD-4.0.0 | 6.84412E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15942E-05 | 0 |
N/S | rs375397094 | -0.832 | 0.822 | N | 0.331 | 0.218 | None | gnomAD-4.0.0 | 2.05324E-06 | None | None | None | None | N | None | 2.99025E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79933E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3407 | ambiguous | 0.3124 | benign | -0.518 | Destabilizing | 0.754 | D | 0.383 | neutral | None | None | None | None | N |
N/C | 0.3069 | likely_benign | 0.2916 | benign | 0.355 | Stabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | N |
N/D | 0.2113 | likely_benign | 0.1963 | benign | -0.282 | Destabilizing | 0.822 | D | 0.325 | neutral | N | 0.433710908 | None | None | N |
N/E | 0.5412 | ambiguous | 0.5213 | ambiguous | -0.298 | Destabilizing | 0.754 | D | 0.284 | neutral | None | None | None | None | N |
N/F | 0.7196 | likely_pathogenic | 0.6905 | pathogenic | -0.753 | Destabilizing | 0.978 | D | 0.547 | neutral | None | None | None | None | N |
N/G | 0.2439 | likely_benign | 0.2228 | benign | -0.733 | Destabilizing | 0.86 | D | 0.293 | neutral | None | None | None | None | N |
N/H | 0.1433 | likely_benign | 0.131 | benign | -0.794 | Destabilizing | 0.032 | N | 0.23 | neutral | D | 0.522137969 | None | None | N |
N/I | 0.5211 | ambiguous | 0.4574 | ambiguous | -0.024 | Destabilizing | 0.97 | D | 0.549 | neutral | D | 0.526004994 | None | None | N |
N/K | 0.4307 | ambiguous | 0.391 | ambiguous | -0.118 | Destabilizing | 0.014 | N | 0.257 | neutral | N | 0.470823715 | None | None | N |
N/L | 0.3439 | ambiguous | 0.322 | benign | -0.024 | Destabilizing | 0.956 | D | 0.498 | neutral | None | None | None | None | N |
N/M | 0.4674 | ambiguous | 0.4334 | ambiguous | 0.511 | Stabilizing | 0.998 | D | 0.499 | neutral | None | None | None | None | N |
N/P | 0.7338 | likely_pathogenic | 0.651 | pathogenic | -0.161 | Destabilizing | 0.978 | D | 0.459 | neutral | None | None | None | None | N |
N/Q | 0.3623 | ambiguous | 0.3491 | ambiguous | -0.595 | Destabilizing | 0.956 | D | 0.267 | neutral | None | None | None | None | N |
N/R | 0.4456 | ambiguous | 0.4087 | ambiguous | -0.044 | Destabilizing | 0.754 | D | 0.241 | neutral | None | None | None | None | N |
N/S | 0.0999 | likely_benign | 0.0943 | benign | -0.333 | Destabilizing | 0.822 | D | 0.331 | neutral | N | 0.468764844 | None | None | N |
N/T | 0.2415 | likely_benign | 0.2102 | benign | -0.2 | Destabilizing | 0.822 | D | 0.247 | neutral | N | 0.48142471 | None | None | N |
N/V | 0.4628 | ambiguous | 0.4151 | ambiguous | -0.161 | Destabilizing | 0.956 | D | 0.55 | neutral | None | None | None | None | N |
N/W | 0.8307 | likely_pathogenic | 0.809 | pathogenic | -0.673 | Destabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
N/Y | 0.2662 | likely_benign | 0.2477 | benign | -0.446 | Destabilizing | 0.942 | D | 0.457 | neutral | N | 0.518020229 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.