Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22697 | 68314;68315;68316 | chr2:178578941;178578940;178578939 | chr2:179443668;179443667;179443666 |
N2AB | 21056 | 63391;63392;63393 | chr2:178578941;178578940;178578939 | chr2:179443668;179443667;179443666 |
N2A | 20129 | 60610;60611;60612 | chr2:178578941;178578940;178578939 | chr2:179443668;179443667;179443666 |
N2B | 13632 | 41119;41120;41121 | chr2:178578941;178578940;178578939 | chr2:179443668;179443667;179443666 |
Novex-1 | 13757 | 41494;41495;41496 | chr2:178578941;178578940;178578939 | chr2:179443668;179443667;179443666 |
Novex-2 | 13824 | 41695;41696;41697 | chr2:178578941;178578940;178578939 | chr2:179443668;179443667;179443666 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.994 | N | 0.749 | 0.412 | 0.498194598333 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
A/V | None | None | 0.979 | N | 0.613 | 0.303 | 0.493295820912 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6678 | likely_pathogenic | 0.6734 | pathogenic | -0.766 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
A/D | 0.879 | likely_pathogenic | 0.8622 | pathogenic | -0.494 | Destabilizing | 0.976 | D | 0.687 | prob.neutral | N | 0.466588544 | None | None | N |
A/E | 0.8371 | likely_pathogenic | 0.8319 | pathogenic | -0.644 | Destabilizing | 0.18 | N | 0.321 | neutral | None | None | None | None | N |
A/F | 0.7349 | likely_pathogenic | 0.7206 | pathogenic | -0.916 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
A/G | 0.3029 | likely_benign | 0.2824 | benign | -0.424 | Destabilizing | 0.958 | D | 0.523 | neutral | N | 0.446792062 | None | None | N |
A/H | 0.8507 | likely_pathogenic | 0.8482 | pathogenic | -0.432 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
A/I | 0.6873 | likely_pathogenic | 0.685 | pathogenic | -0.369 | Destabilizing | 0.995 | D | 0.749 | deleterious | None | None | None | None | N |
A/K | 0.9387 | likely_pathogenic | 0.9347 | pathogenic | -0.689 | Destabilizing | 0.982 | D | 0.724 | prob.delet. | None | None | None | None | N |
A/L | 0.4475 | ambiguous | 0.4441 | ambiguous | -0.369 | Destabilizing | 0.968 | D | 0.7 | prob.neutral | None | None | None | None | N |
A/M | 0.4786 | ambiguous | 0.4638 | ambiguous | -0.379 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
A/N | 0.596 | likely_pathogenic | 0.58 | pathogenic | -0.354 | Destabilizing | 0.991 | D | 0.732 | prob.delet. | None | None | None | None | N |
A/P | 0.8834 | likely_pathogenic | 0.8769 | pathogenic | -0.33 | Destabilizing | 0.994 | D | 0.749 | deleterious | N | 0.461545297 | None | None | N |
A/Q | 0.758 | likely_pathogenic | 0.7625 | pathogenic | -0.645 | Destabilizing | 0.982 | D | 0.749 | deleterious | None | None | None | None | N |
A/R | 0.8762 | likely_pathogenic | 0.8743 | pathogenic | -0.201 | Destabilizing | 0.991 | D | 0.748 | deleterious | None | None | None | None | N |
A/S | 0.134 | likely_benign | 0.1328 | benign | -0.575 | Destabilizing | 0.958 | D | 0.457 | neutral | N | 0.436188279 | None | None | N |
A/T | 0.1975 | likely_benign | 0.1819 | benign | -0.645 | Destabilizing | 0.988 | D | 0.692 | prob.neutral | N | 0.436575068 | None | None | N |
A/V | 0.3684 | ambiguous | 0.3631 | ambiguous | -0.33 | Destabilizing | 0.979 | D | 0.613 | neutral | N | 0.461876158 | None | None | N |
A/W | 0.9564 | likely_pathogenic | 0.9567 | pathogenic | -1.052 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
A/Y | 0.8477 | likely_pathogenic | 0.8328 | pathogenic | -0.705 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.