Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22703 | 68332;68333;68334 | chr2:178578923;178578922;178578921 | chr2:179443650;179443649;179443648 |
N2AB | 21062 | 63409;63410;63411 | chr2:178578923;178578922;178578921 | chr2:179443650;179443649;179443648 |
N2A | 20135 | 60628;60629;60630 | chr2:178578923;178578922;178578921 | chr2:179443650;179443649;179443648 |
N2B | 13638 | 41137;41138;41139 | chr2:178578923;178578922;178578921 | chr2:179443650;179443649;179443648 |
Novex-1 | 13763 | 41512;41513;41514 | chr2:178578923;178578922;178578921 | chr2:179443650;179443649;179443648 |
Novex-2 | 13830 | 41713;41714;41715 | chr2:178578923;178578922;178578921 | chr2:179443650;179443649;179443648 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | rs2047065698 | None | 0.999 | N | 0.583 | 0.488 | 0.687538048876 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/C | rs2047065698 | None | 0.999 | N | 0.583 | 0.488 | 0.687538048876 | gnomAD-4.0.0 | 6.58068E-06 | None | None | None | None | N | None | 0 | 6.55824E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8744 | likely_pathogenic | 0.8592 | pathogenic | -2.288 | Highly Destabilizing | 0.939 | D | 0.534 | neutral | None | None | None | None | N |
F/C | 0.4091 | ambiguous | 0.3583 | ambiguous | -1.553 | Destabilizing | 0.999 | D | 0.583 | neutral | N | 0.440367522 | None | None | N |
F/D | 0.9902 | likely_pathogenic | 0.9879 | pathogenic | -1.753 | Destabilizing | 0.997 | D | 0.605 | neutral | None | None | None | None | N |
F/E | 0.9833 | likely_pathogenic | 0.9825 | pathogenic | -1.595 | Destabilizing | 0.997 | D | 0.609 | neutral | None | None | None | None | N |
F/G | 0.9531 | likely_pathogenic | 0.948 | pathogenic | -2.677 | Highly Destabilizing | 0.969 | D | 0.581 | neutral | None | None | None | None | N |
F/H | 0.8603 | likely_pathogenic | 0.8316 | pathogenic | -0.934 | Destabilizing | 0.991 | D | 0.518 | neutral | None | None | None | None | N |
F/I | 0.481 | ambiguous | 0.4615 | ambiguous | -1.069 | Destabilizing | 0.852 | D | 0.438 | neutral | N | 0.49085227 | None | None | N |
F/K | 0.9759 | likely_pathogenic | 0.9771 | pathogenic | -1.797 | Destabilizing | 0.991 | D | 0.608 | neutral | None | None | None | None | N |
F/L | 0.9216 | likely_pathogenic | 0.9043 | pathogenic | -1.069 | Destabilizing | 0.509 | D | 0.389 | neutral | N | 0.475997461 | None | None | N |
F/M | 0.5762 | likely_pathogenic | 0.6232 | pathogenic | -0.862 | Destabilizing | 0.373 | N | 0.234 | neutral | None | None | None | None | N |
F/N | 0.9439 | likely_pathogenic | 0.9413 | pathogenic | -2.144 | Highly Destabilizing | 0.997 | D | 0.609 | neutral | None | None | None | None | N |
F/P | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -1.476 | Destabilizing | 0.997 | D | 0.624 | neutral | None | None | None | None | N |
F/Q | 0.9388 | likely_pathogenic | 0.9403 | pathogenic | -2.092 | Highly Destabilizing | 0.991 | D | 0.607 | neutral | None | None | None | None | N |
F/R | 0.9502 | likely_pathogenic | 0.9494 | pathogenic | -1.265 | Destabilizing | 0.991 | D | 0.603 | neutral | None | None | None | None | N |
F/S | 0.8565 | likely_pathogenic | 0.8274 | pathogenic | -2.869 | Highly Destabilizing | 0.959 | D | 0.51 | neutral | N | 0.478827977 | None | None | N |
F/T | 0.8896 | likely_pathogenic | 0.8879 | pathogenic | -2.603 | Highly Destabilizing | 0.969 | D | 0.532 | neutral | None | None | None | None | N |
F/V | 0.4534 | ambiguous | 0.4284 | ambiguous | -1.476 | Destabilizing | 0.704 | D | 0.473 | neutral | N | 0.477341468 | None | None | N |
F/W | 0.7297 | likely_pathogenic | 0.687 | pathogenic | -0.131 | Destabilizing | 0.997 | D | 0.449 | neutral | None | None | None | None | N |
F/Y | 0.2265 | likely_benign | 0.1804 | benign | -0.459 | Destabilizing | 0.134 | N | 0.225 | neutral | N | 0.42479785 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.