Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22705 | 68338;68339;68340 | chr2:178578917;178578916;178578915 | chr2:179443644;179443643;179443642 |
N2AB | 21064 | 63415;63416;63417 | chr2:178578917;178578916;178578915 | chr2:179443644;179443643;179443642 |
N2A | 20137 | 60634;60635;60636 | chr2:178578917;178578916;178578915 | chr2:179443644;179443643;179443642 |
N2B | 13640 | 41143;41144;41145 | chr2:178578917;178578916;178578915 | chr2:179443644;179443643;179443642 |
Novex-1 | 13765 | 41518;41519;41520 | chr2:178578917;178578916;178578915 | chr2:179443644;179443643;179443642 |
Novex-2 | 13832 | 41719;41720;41721 | chr2:178578917;178578916;178578915 | chr2:179443644;179443643;179443642 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1461683344 | -0.285 | 0.997 | N | 0.54 | 0.236 | 0.647883942074 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/I | rs1461683344 | -0.285 | 0.997 | N | 0.54 | 0.236 | 0.647883942074 | gnomAD-4.0.0 | 6.36898E-06 | None | None | None | None | N | None | 1.69914E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6424 | likely_pathogenic | 0.5916 | pathogenic | -1.956 | Destabilizing | 0.999 | D | 0.648 | neutral | N | 0.47553043 | None | None | N |
V/C | 0.8917 | likely_pathogenic | 0.8892 | pathogenic | -1.456 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
V/D | 0.9895 | likely_pathogenic | 0.9901 | pathogenic | -2.341 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/E | 0.9658 | likely_pathogenic | 0.9685 | pathogenic | -2.106 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.537845366 | None | None | N |
V/F | 0.6352 | likely_pathogenic | 0.5617 | ambiguous | -1.143 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
V/G | 0.8414 | likely_pathogenic | 0.8388 | pathogenic | -2.512 | Highly Destabilizing | 1.0 | D | 0.834 | deleterious | D | 0.52648906 | None | None | N |
V/H | 0.9882 | likely_pathogenic | 0.9876 | pathogenic | -2.211 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/I | 0.089 | likely_benign | 0.0817 | benign | -0.402 | Destabilizing | 0.997 | D | 0.54 | neutral | N | 0.505688437 | None | None | N |
V/K | 0.9798 | likely_pathogenic | 0.9828 | pathogenic | -1.651 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
V/L | 0.4575 | ambiguous | 0.4391 | ambiguous | -0.402 | Destabilizing | 0.997 | D | 0.658 | neutral | N | 0.521615107 | None | None | N |
V/M | 0.4269 | ambiguous | 0.3927 | ambiguous | -0.428 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/N | 0.9633 | likely_pathogenic | 0.9648 | pathogenic | -1.97 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/P | 0.9763 | likely_pathogenic | 0.9751 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/Q | 0.9631 | likely_pathogenic | 0.9649 | pathogenic | -1.778 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
V/R | 0.9722 | likely_pathogenic | 0.9754 | pathogenic | -1.559 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/S | 0.8955 | likely_pathogenic | 0.8899 | pathogenic | -2.624 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/T | 0.8136 | likely_pathogenic | 0.8105 | pathogenic | -2.227 | Highly Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
V/W | 0.9908 | likely_pathogenic | 0.9883 | pathogenic | -1.621 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/Y | 0.9537 | likely_pathogenic | 0.9447 | pathogenic | -1.214 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.