Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22709 | 68350;68351;68352 | chr2:178578905;178578904;178578903 | chr2:179443632;179443631;179443630 |
N2AB | 21068 | 63427;63428;63429 | chr2:178578905;178578904;178578903 | chr2:179443632;179443631;179443630 |
N2A | 20141 | 60646;60647;60648 | chr2:178578905;178578904;178578903 | chr2:179443632;179443631;179443630 |
N2B | 13644 | 41155;41156;41157 | chr2:178578905;178578904;178578903 | chr2:179443632;179443631;179443630 |
Novex-1 | 13769 | 41530;41531;41532 | chr2:178578905;178578904;178578903 | chr2:179443632;179443631;179443630 |
Novex-2 | 13836 | 41731;41732;41733 | chr2:178578905;178578904;178578903 | chr2:179443632;179443631;179443630 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | 0.045 | N | 0.183 | 0.145 | 0.117506650769 | gnomAD-4.0.0 | 1.59223E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77685E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3262 | likely_benign | 0.3085 | benign | 0.026 | Stabilizing | 0.4 | N | 0.332 | neutral | None | None | None | None | N |
H/C | 0.2062 | likely_benign | 0.1941 | benign | 0.574 | Stabilizing | 0.992 | D | 0.305 | neutral | None | None | None | None | N |
H/D | 0.384 | ambiguous | 0.3688 | ambiguous | -0.392 | Destabilizing | 0.379 | N | 0.343 | neutral | N | 0.462798877 | None | None | N |
H/E | 0.3341 | likely_benign | 0.3276 | benign | -0.319 | Destabilizing | 0.25 | N | 0.241 | neutral | None | None | None | None | N |
H/F | 0.3461 | ambiguous | 0.3232 | benign | 1.106 | Stabilizing | 0.739 | D | 0.341 | neutral | None | None | None | None | N |
H/G | 0.386 | ambiguous | 0.3695 | ambiguous | -0.309 | Destabilizing | 0.617 | D | 0.355 | neutral | None | None | None | None | N |
H/I | 0.3183 | likely_benign | 0.2633 | benign | 0.923 | Stabilizing | 0.739 | D | 0.361 | neutral | None | None | None | None | N |
H/K | 0.2199 | likely_benign | 0.225 | benign | 0.151 | Stabilizing | 0.447 | N | 0.353 | neutral | None | None | None | None | N |
H/L | 0.1358 | likely_benign | 0.1161 | benign | 0.923 | Stabilizing | 0.004 | N | 0.232 | neutral | N | 0.410657903 | None | None | N |
H/M | 0.4046 | ambiguous | 0.3662 | ambiguous | 0.574 | Stabilizing | 0.85 | D | 0.313 | neutral | None | None | None | None | N |
H/N | 0.1376 | likely_benign | 0.1244 | benign | -0.065 | Destabilizing | 0.016 | N | 0.112 | neutral | N | 0.439460658 | None | None | N |
H/P | 0.4056 | ambiguous | 0.3651 | ambiguous | 0.648 | Stabilizing | 0.004 | N | 0.237 | neutral | N | 0.490524196 | None | None | N |
H/Q | 0.1643 | likely_benign | 0.1536 | benign | 0.115 | Stabilizing | 0.045 | N | 0.183 | neutral | N | 0.410311187 | None | None | N |
H/R | 0.1065 | likely_benign | 0.1041 | benign | -0.502 | Destabilizing | 0.549 | D | 0.315 | neutral | N | 0.409905755 | None | None | N |
H/S | 0.2689 | likely_benign | 0.2569 | benign | 0.073 | Stabilizing | 0.617 | D | 0.337 | neutral | None | None | None | None | N |
H/T | 0.2363 | likely_benign | 0.2354 | benign | 0.259 | Stabilizing | 0.617 | D | 0.353 | neutral | None | None | None | None | N |
H/V | 0.2433 | likely_benign | 0.2139 | benign | 0.648 | Stabilizing | 0.447 | N | 0.359 | neutral | None | None | None | None | N |
H/W | 0.4274 | ambiguous | 0.4037 | ambiguous | 1.246 | Stabilizing | 0.992 | D | 0.334 | neutral | None | None | None | None | N |
H/Y | 0.1364 | likely_benign | 0.1274 | benign | 1.369 | Stabilizing | 0.712 | D | 0.345 | neutral | N | 0.509109957 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.