Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22718 | 68377;68378;68379 | chr2:178578878;178578877;178578876 | chr2:179443605;179443604;179443603 |
N2AB | 21077 | 63454;63455;63456 | chr2:178578878;178578877;178578876 | chr2:179443605;179443604;179443603 |
N2A | 20150 | 60673;60674;60675 | chr2:178578878;178578877;178578876 | chr2:179443605;179443604;179443603 |
N2B | 13653 | 41182;41183;41184 | chr2:178578878;178578877;178578876 | chr2:179443605;179443604;179443603 |
Novex-1 | 13778 | 41557;41558;41559 | chr2:178578878;178578877;178578876 | chr2:179443605;179443604;179443603 |
Novex-2 | 13845 | 41758;41759;41760 | chr2:178578878;178578877;178578876 | chr2:179443605;179443604;179443603 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.993 | D | 0.836 | 0.709 | 0.845016314037 | gnomAD-4.0.0 | 6.84412E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99692E-07 | 0 | 0 |
V/I | None | None | 0.117 | N | 0.316 | 0.229 | 0.534239989213 | gnomAD-4.0.0 | 3.42206E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49846E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8745 | likely_pathogenic | 0.8348 | pathogenic | -2.372 | Highly Destabilizing | 0.977 | D | 0.644 | neutral | D | 0.526475148 | None | None | N |
V/C | 0.9569 | likely_pathogenic | 0.9507 | pathogenic | -1.813 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/D | 0.9976 | likely_pathogenic | 0.9985 | pathogenic | -3.43 | Highly Destabilizing | 0.999 | D | 0.899 | deleterious | D | 0.622518726 | None | None | N |
V/E | 0.9939 | likely_pathogenic | 0.9959 | pathogenic | -3.104 | Highly Destabilizing | 0.999 | D | 0.882 | deleterious | None | None | None | None | N |
V/F | 0.8989 | likely_pathogenic | 0.9079 | pathogenic | -1.335 | Destabilizing | 0.993 | D | 0.836 | deleterious | D | 0.562683658 | None | None | N |
V/G | 0.9281 | likely_pathogenic | 0.9352 | pathogenic | -2.986 | Highly Destabilizing | 0.999 | D | 0.892 | deleterious | D | 0.622518726 | None | None | N |
V/H | 0.9983 | likely_pathogenic | 0.9987 | pathogenic | -2.905 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
V/I | 0.0969 | likely_benign | 0.0888 | benign | -0.579 | Destabilizing | 0.117 | N | 0.316 | neutral | N | 0.51103362 | None | None | N |
V/K | 0.995 | likely_pathogenic | 0.9971 | pathogenic | -1.947 | Destabilizing | 0.998 | D | 0.883 | deleterious | None | None | None | None | N |
V/L | 0.6299 | likely_pathogenic | 0.6569 | pathogenic | -0.579 | Destabilizing | 0.898 | D | 0.587 | neutral | N | 0.505631733 | None | None | N |
V/M | 0.7813 | likely_pathogenic | 0.7955 | pathogenic | -0.858 | Destabilizing | 0.995 | D | 0.794 | deleterious | None | None | None | None | N |
V/N | 0.9926 | likely_pathogenic | 0.9948 | pathogenic | -2.658 | Highly Destabilizing | 0.999 | D | 0.909 | deleterious | None | None | None | None | N |
V/P | 0.9932 | likely_pathogenic | 0.9926 | pathogenic | -1.159 | Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
V/Q | 0.9937 | likely_pathogenic | 0.9957 | pathogenic | -2.29 | Highly Destabilizing | 0.999 | D | 0.91 | deleterious | None | None | None | None | N |
V/R | 0.9904 | likely_pathogenic | 0.9938 | pathogenic | -2.052 | Highly Destabilizing | 0.999 | D | 0.913 | deleterious | None | None | None | None | N |
V/S | 0.9743 | likely_pathogenic | 0.9726 | pathogenic | -3.153 | Highly Destabilizing | 0.998 | D | 0.885 | deleterious | None | None | None | None | N |
V/T | 0.9438 | likely_pathogenic | 0.9398 | pathogenic | -2.668 | Highly Destabilizing | 0.983 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/W | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -1.935 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/Y | 0.9903 | likely_pathogenic | 0.9918 | pathogenic | -1.605 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.