Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2272 | 7039;7040;7041 | chr2:178774450;178774449;178774448 | chr2:179639177;179639176;179639175 |
N2AB | 2272 | 7039;7040;7041 | chr2:178774450;178774449;178774448 | chr2:179639177;179639176;179639175 |
N2A | 2272 | 7039;7040;7041 | chr2:178774450;178774449;178774448 | chr2:179639177;179639176;179639175 |
N2B | 2226 | 6901;6902;6903 | chr2:178774450;178774449;178774448 | chr2:179639177;179639176;179639175 |
Novex-1 | 2226 | 6901;6902;6903 | chr2:178774450;178774449;178774448 | chr2:179639177;179639176;179639175 |
Novex-2 | 2226 | 6901;6902;6903 | chr2:178774450;178774449;178774448 | chr2:179639177;179639176;179639175 |
Novex-3 | 2272 | 7039;7040;7041 | chr2:178774450;178774449;178774448 | chr2:179639177;179639176;179639175 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.92 | N | 0.445 | 0.28 | 0.326616659874 | gnomAD-4.0.0 | 1.59336E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85727E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0971 | likely_benign | 0.105 | benign | -0.931 | Destabilizing | 0.826 | D | 0.423 | neutral | N | 0.475980209 | None | None | N |
E/C | 0.7355 | likely_pathogenic | 0.7585 | pathogenic | -0.411 | Destabilizing | 0.999 | D | 0.406 | neutral | None | None | None | None | N |
E/D | 0.1169 | likely_benign | 0.1196 | benign | -0.743 | Destabilizing | 0.704 | D | 0.45 | neutral | N | 0.473744782 | None | None | N |
E/F | 0.6218 | likely_pathogenic | 0.6468 | pathogenic | -0.292 | Destabilizing | 0.964 | D | 0.43 | neutral | None | None | None | None | N |
E/G | 0.0969 | likely_benign | 0.1037 | benign | -1.269 | Destabilizing | 0.92 | D | 0.444 | neutral | N | 0.412816584 | None | None | N |
E/H | 0.3905 | ambiguous | 0.3961 | ambiguous | -0.403 | Destabilizing | 0.1 | N | 0.203 | neutral | None | None | None | None | N |
E/I | 0.2645 | likely_benign | 0.2807 | benign | -0.014 | Destabilizing | 0.991 | D | 0.441 | neutral | None | None | None | None | N |
E/K | 0.1152 | likely_benign | 0.1156 | benign | -0.3 | Destabilizing | 0.92 | D | 0.445 | neutral | N | 0.458897817 | None | None | N |
E/L | 0.264 | likely_benign | 0.2851 | benign | -0.014 | Destabilizing | 0.939 | D | 0.437 | neutral | None | None | None | None | N |
E/M | 0.3255 | likely_benign | 0.3507 | ambiguous | 0.348 | Stabilizing | 0.999 | D | 0.395 | neutral | None | None | None | None | N |
E/N | 0.1633 | likely_benign | 0.1715 | benign | -0.836 | Destabilizing | 0.17 | N | 0.164 | neutral | None | None | None | None | N |
E/P | 0.1993 | likely_benign | 0.2154 | benign | -0.299 | Destabilizing | 0.046 | N | 0.189 | neutral | None | None | None | None | N |
E/Q | 0.1169 | likely_benign | 0.1206 | benign | -0.717 | Destabilizing | 0.959 | D | 0.427 | neutral | N | 0.487637419 | None | None | N |
E/R | 0.2324 | likely_benign | 0.2306 | benign | 0.007 | Stabilizing | 0.969 | D | 0.41 | neutral | None | None | None | None | N |
E/S | 0.1397 | likely_benign | 0.1479 | benign | -1.119 | Destabilizing | 0.939 | D | 0.413 | neutral | None | None | None | None | N |
E/T | 0.144 | likely_benign | 0.1581 | benign | -0.83 | Destabilizing | 0.939 | D | 0.404 | neutral | None | None | None | None | N |
E/V | 0.1447 | likely_benign | 0.1571 | benign | -0.299 | Destabilizing | 0.92 | D | 0.444 | neutral | N | 0.493415866 | None | None | N |
E/W | 0.8514 | likely_pathogenic | 0.8612 | pathogenic | 0.055 | Stabilizing | 0.999 | D | 0.396 | neutral | None | None | None | None | N |
E/Y | 0.4883 | ambiguous | 0.5049 | ambiguous | -0.007 | Destabilizing | 0.17 | N | 0.294 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.