Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22726 | 68401;68402;68403 | chr2:178578854;178578853;178578852 | chr2:179443581;179443580;179443579 |
N2AB | 21085 | 63478;63479;63480 | chr2:178578854;178578853;178578852 | chr2:179443581;179443580;179443579 |
N2A | 20158 | 60697;60698;60699 | chr2:178578854;178578853;178578852 | chr2:179443581;179443580;179443579 |
N2B | 13661 | 41206;41207;41208 | chr2:178578854;178578853;178578852 | chr2:179443581;179443580;179443579 |
Novex-1 | 13786 | 41581;41582;41583 | chr2:178578854;178578853;178578852 | chr2:179443581;179443580;179443579 |
Novex-2 | 13853 | 41782;41783;41784 | chr2:178578854;178578853;178578852 | chr2:179443581;179443580;179443579 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1553620392 | None | 0.046 | N | 0.24 | 0.05 | 0.340992353424 | gnomAD-4.0.0 | 1.59279E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86126E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2425 | likely_benign | 0.2593 | benign | -0.991 | Destabilizing | 0.939 | D | 0.604 | neutral | N | 0.46143344 | None | None | N |
V/C | 0.7698 | likely_pathogenic | 0.8142 | pathogenic | -0.836 | Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
V/D | 0.7565 | likely_pathogenic | 0.7777 | pathogenic | -0.61 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | N |
V/E | 0.5534 | ambiguous | 0.6161 | pathogenic | -0.694 | Destabilizing | 0.997 | D | 0.805 | deleterious | N | 0.478920336 | None | None | N |
V/F | 0.3296 | likely_benign | 0.3151 | benign | -1.022 | Destabilizing | 0.986 | D | 0.783 | deleterious | None | None | None | None | N |
V/G | 0.4247 | ambiguous | 0.466 | ambiguous | -1.192 | Destabilizing | 0.997 | D | 0.797 | deleterious | N | 0.466467259 | None | None | N |
V/H | 0.7942 | likely_pathogenic | 0.8294 | pathogenic | -0.611 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
V/I | 0.0754 | likely_benign | 0.0682 | benign | -0.584 | Destabilizing | 0.046 | N | 0.24 | neutral | N | 0.429822454 | None | None | N |
V/K | 0.5098 | ambiguous | 0.6075 | pathogenic | -0.653 | Destabilizing | 0.993 | D | 0.812 | deleterious | None | None | None | None | N |
V/L | 0.3454 | ambiguous | 0.3604 | ambiguous | -0.584 | Destabilizing | 0.76 | D | 0.527 | neutral | N | 0.465396465 | None | None | N |
V/M | 0.2225 | likely_benign | 0.2201 | benign | -0.454 | Destabilizing | 0.986 | D | 0.783 | deleterious | None | None | None | None | N |
V/N | 0.5589 | ambiguous | 0.5835 | pathogenic | -0.385 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | N |
V/P | 0.7259 | likely_pathogenic | 0.6773 | pathogenic | -0.684 | Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
V/Q | 0.495 | ambiguous | 0.5605 | ambiguous | -0.675 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
V/R | 0.4347 | ambiguous | 0.5243 | ambiguous | -0.071 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | N |
V/S | 0.3701 | ambiguous | 0.4056 | ambiguous | -0.873 | Destabilizing | 0.993 | D | 0.799 | deleterious | None | None | None | None | N |
V/T | 0.1983 | likely_benign | 0.2052 | benign | -0.853 | Destabilizing | 0.953 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/W | 0.9111 | likely_pathogenic | 0.9102 | pathogenic | -1.048 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
V/Y | 0.7693 | likely_pathogenic | 0.7766 | pathogenic | -0.763 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.