Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22730 | 68413;68414;68415 | chr2:178578842;178578841;178578840 | chr2:179443569;179443568;179443567 |
N2AB | 21089 | 63490;63491;63492 | chr2:178578842;178578841;178578840 | chr2:179443569;179443568;179443567 |
N2A | 20162 | 60709;60710;60711 | chr2:178578842;178578841;178578840 | chr2:179443569;179443568;179443567 |
N2B | 13665 | 41218;41219;41220 | chr2:178578842;178578841;178578840 | chr2:179443569;179443568;179443567 |
Novex-1 | 13790 | 41593;41594;41595 | chr2:178578842;178578841;178578840 | chr2:179443569;179443568;179443567 |
Novex-2 | 13857 | 41794;41795;41796 | chr2:178578842;178578841;178578840 | chr2:179443569;179443568;179443567 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs1273726879 | -0.652 | 0.994 | N | 0.777 | 0.211 | 0.52250569628 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.3E-05 | None | 0 | 0 | 0 |
L/M | rs1273726879 | -0.652 | 0.994 | N | 0.777 | 0.211 | 0.52250569628 | gnomAD-4.0.0 | 1.59554E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43951E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.671 | likely_pathogenic | 0.6701 | pathogenic | -2.013 | Highly Destabilizing | 0.938 | D | 0.608 | neutral | None | None | None | None | N |
L/C | 0.6819 | likely_pathogenic | 0.7033 | pathogenic | -1.374 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/D | 0.9821 | likely_pathogenic | 0.9829 | pathogenic | -1.344 | Destabilizing | 0.998 | D | 0.854 | deleterious | None | None | None | None | N |
L/E | 0.8339 | likely_pathogenic | 0.849 | pathogenic | -1.222 | Destabilizing | 0.995 | D | 0.819 | deleterious | None | None | None | None | N |
L/F | 0.5516 | ambiguous | 0.5627 | ambiguous | -1.182 | Destabilizing | 0.991 | D | 0.76 | deleterious | None | None | None | None | N |
L/G | 0.9024 | likely_pathogenic | 0.9103 | pathogenic | -2.453 | Highly Destabilizing | 0.995 | D | 0.805 | deleterious | None | None | None | None | N |
L/H | 0.7949 | likely_pathogenic | 0.8172 | pathogenic | -1.706 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
L/I | 0.1311 | likely_benign | 0.1279 | benign | -0.81 | Destabilizing | 0.938 | D | 0.611 | neutral | None | None | None | None | N |
L/K | 0.7411 | likely_pathogenic | 0.7876 | pathogenic | -1.314 | Destabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | N |
L/M | 0.1976 | likely_benign | 0.211 | benign | -0.806 | Destabilizing | 0.994 | D | 0.777 | deleterious | N | 0.490203374 | None | None | N |
L/N | 0.8735 | likely_pathogenic | 0.8789 | pathogenic | -1.329 | Destabilizing | 0.998 | D | 0.852 | deleterious | None | None | None | None | N |
L/P | 0.9744 | likely_pathogenic | 0.977 | pathogenic | -1.184 | Destabilizing | 0.998 | D | 0.846 | deleterious | N | 0.48665452 | None | None | N |
L/Q | 0.5138 | ambiguous | 0.545 | ambiguous | -1.335 | Destabilizing | 0.998 | D | 0.84 | deleterious | N | 0.489696395 | None | None | N |
L/R | 0.6739 | likely_pathogenic | 0.7157 | pathogenic | -0.958 | Destabilizing | 0.994 | D | 0.831 | deleterious | N | 0.489442905 | None | None | N |
L/S | 0.7947 | likely_pathogenic | 0.7772 | pathogenic | -2.103 | Highly Destabilizing | 0.995 | D | 0.761 | deleterious | None | None | None | None | N |
L/T | 0.591 | likely_pathogenic | 0.6035 | pathogenic | -1.848 | Destabilizing | 0.991 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/V | 0.1812 | likely_benign | 0.1799 | benign | -1.184 | Destabilizing | 0.067 | N | 0.446 | neutral | N | 0.477326131 | None | None | N |
L/W | 0.7766 | likely_pathogenic | 0.8215 | pathogenic | -1.349 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
L/Y | 0.8335 | likely_pathogenic | 0.8597 | pathogenic | -1.083 | Destabilizing | 0.995 | D | 0.826 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.